Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
seq1 105 8e-18
>seq4
Length=3241893
Score = 118 bits (130), Expect = 1e-21
Identities = 681/1082 (63%), Gaps = 36/1082 (3%)
Strand=Plus/Minus
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||| | || || ||| || |||||||||||||||| | ||||| ||||| ||||||||
Sbjct 827129 TGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGAAACCCATACATGCTGTACAAAGAT 827070
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| || || | ||||| || || |||||| |||| |||| || |||||||| ||
Sbjct 827069 GCTTGCAATCGCAAGAGCAACCAGAAGAATCTGGGAACGATCCGCAGCTCCAACCTTTGC 827010
Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457
||||| ||| | | | || || ||| || ||||| || |||||||| |
Sbjct 827009 ACAGAGATCATCCAGTACACCTCTCCTGAGGAGGTCGCAGTGTGCAATCTCGCATCTTTA 826950
Query 112458 GCTCTCCCCAAGTATGTGGA---TCCAGAGACAAAGACATTTGATTATGAAAAACTCCAC 112514
||||| |||| ||||||||| ||| | | || | || | | ||||| ||
Sbjct 826949 GCTCTGCCCATGTATGTGGACATTCCTCATGCCGAG---TACGACTTCCAGAAACTGCAT 826893
Query 112515 GAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCC 112574
|| ||| | || ||||| || || |||| | |||||| ||| ||||||
Sbjct 826892 GAGGTTGTTCAGACCGTCACTGTCAATCTCAACAAGATCATTGATGTCAATCATTACCCG 826833
Query 112575 GTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGT 112634
||| | || || || || | | |||| | || ||||| ||||| || ||||||
Sbjct 826832 GTTCCGGAAGCCCGCAACAGCAACTTCAAACACAGGCCCATTGGCCTCGGCGTTCAAGGT 826773
Query 112635 CTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAAT 112693
|| || || || ||| || || || ||| || || || || | | | |
Sbjct 826772 CTTGCCGACGTCTTC-CTCGCCCTCCGATTGCCTTTCGAGTCTCCTGAGGCTAGGAAGCT 826714
Query 112694 CAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGC 112753
|| | || ||||| || || || || || || || || | || | ||
Sbjct 826713 TAACATCCAAATCTTTGAAACCATATACCATGCTGCCCTCACCGCATCATGCAAGCTTGC 826654
Query 112754 AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCA 112813
| | ||| || |||||| ||| ||| || || || || || ||||| | |||||
Sbjct 826653 CAAAGAACTTGGACCCTATGAATCCTATGAAGGCTCCCCTGCCTCGCAAGGCATTCTTCA 826594
Query 112814 ATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAGGAA 112871
|| ||| |||| |||| || | || | || || | |||||||| |||||||| |
Sbjct 826593 ATATGACATGT-GGAATGTCACCCCCA-CTGATCTTTGGGACTGGGATGCTCTCAAAGCT 826536
Query 112872 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931
|| | | || || || ||| ||| | |||| || ||||| || |||||
Sbjct 826535 GAGATTGCCCAACATGGCCTCCGCAACTCCCTTCTCGTGGCTCCTATGCCGACTGCCTCT 826476
Query 112932 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTG 112991
|| | || || | ||||| || ||||||||||| || || || | ||||||||
Sbjct 826475 ACATCTCAGATTCTCGGTAACAACGAATGCTTTGAGCCTTATACCTCCAACATCTACTCC 826416
Query 112992 AGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAA 113051
| | ||||| || ||||| ||| |||| ||| | ||| || ||||||
Sbjct 826415 CGCCGTGTTCTCGCTGGCGAGTTCCAGATCGTCA------ATC-CCTGGTTG--CTCAAA 826365
Query 113052 ---------GAGATTGGTCTCTGGTCCAAGGATATGAAGGAT---CTCATGGTGAAAGCG 113099
|| || || | |||||| | | |||||| || |||| | ||
Sbjct 826364 GATCTTGTCGACATGGGCTTGTGGTCCGACAACATGAAGAATAGGATCATCGCCGAA--- 826308
Query 113100 GGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACA 113159
||||| || ||||| || | || || ||||| || || | ||| ||
Sbjct 826307 GGTGGCTCTATTCAGCGGATCCCCAACATCCCCGATGATATCAAAGCACTCTACAAGACT 826248
Query 113160 GTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 113219
|| ||||||||| || || || | | ||||| ||||||||||| ||||||
Sbjct 826247 GTGTGGGAAATCTCACAGAGACATATCCTGCAGATGGCTGCAGATCGTGGCGCCTTCATC 826188
Query 113220 GATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCT 113279
|| || ||| | | ||| | |||| | || || ||| |||| || | |||
Sbjct 826187 GACCAGTCTCAGTCTCTCAATATCCACATGAAGGAACCTACCATGGGCAAGATCACCTCT 826128
Query 113280 ATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAG 113339
|||||| | | |||||| |||||||| ||||| ||||| ||||| ||| | | |
Sbjct 826127 ATGCACTTTGCTGGGTGGAAGCTCGGTCTCAAGACGGGCATGTACTACCTTCGAACGATG 826068
Query 113340 GC 113341
||
Sbjct 826067 GC 826066
>seq1
Length=5232100
Score = 105 bits (116), Expect = 8e-18
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||||| || || | ||||| || || ||||| ||||| ||| | | |||| | |
Sbjct 3073551 AGTTCCCTGCATCCGCAAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACAAGAGCTC 3073492
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
|||| || ||| || | || ||||| ||| |||||||| |||||| ||| |
Sbjct 3073491 CA-CCTTCGCGTCGCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGAT 3073433
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
||||| ||| | || | |||||||||||||| ||||||||||| || || ||||||
Sbjct 3073432 CCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCG 3073374
Query 102288 AACGAGCTTATCTCTCGTGACGAGGG 102313
|| || || ||||||||||| |||||
Sbjct 3073373 AATGAACTCATCTCTCGTGATGAGGG 3073348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742012036000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |