Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq1 105 8e-18 >seq4 Length=3241893 Score = 118 bits (130), Expect = 1e-21 Identities = 681/1082 (63%), Gaps = 36/1082 (3%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | || || ||| || |||||||||||||||| | ||||| ||||| |||||||| Sbjct 827129 TGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGAAACCCATACATGCTGTACAAAGAT 827070 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || || || | ||||| || || |||||| |||| |||| || |||||||| || Sbjct 827069 GCTTGCAATCGCAAGAGCAACCAGAAGAATCTGGGAACGATCCGCAGCTCCAACCTTTGC 827010 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 ||||| ||| | | | || || ||| || ||||| || |||||||| | Sbjct 827009 ACAGAGATCATCCAGTACACCTCTCCTGAGGAGGTCGCAGTGTGCAATCTCGCATCTTTA 826950 Query 112458 GCTCTCCCCAAGTATGTGGA---TCCAGAGACAAAGACATTTGATTATGAAAAACTCCAC 112514 ||||| |||| ||||||||| ||| | | || | || | | ||||| || Sbjct 826949 GCTCTGCCCATGTATGTGGACATTCCTCATGCCGAG---TACGACTTCCAGAAACTGCAT 826893 Query 112515 GAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCC 112574 || ||| | || ||||| || || |||| | |||||| ||| |||||| Sbjct 826892 GAGGTTGTTCAGACCGTCACTGTCAATCTCAACAAGATCATTGATGTCAATCATTACCCG 826833 Query 112575 GTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGT 112634 ||| | || || || || | | |||| | || ||||| ||||| || |||||| Sbjct 826832 GTTCCGGAAGCCCGCAACAGCAACTTCAAACACAGGCCCATTGGCCTCGGCGTTCAAGGT 826773 Query 112635 CTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAAT 112693 || || || || ||| || || || ||| || || || || | | | | Sbjct 826772 CTTGCCGACGTCTTC-CTCGCCCTCCGATTGCCTTTCGAGTCTCCTGAGGCTAGGAAGCT 826714 Query 112694 CAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGC 112753 || | || ||||| || || || || || || || || | || | || Sbjct 826713 TAACATCCAAATCTTTGAAACCATATACCATGCTGCCCTCACCGCATCATGCAAGCTTGC 826654 Query 112754 AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCA 112813 | | ||| || |||||| ||| ||| || || || || || ||||| | ||||| Sbjct 826653 CAAAGAACTTGGACCCTATGAATCCTATGAAGGCTCCCCTGCCTCGCAAGGCATTCTTCA 826594 Query 112814 ATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACGCTCTCAAGGAA 112871 || ||| |||| |||| || | || | || || | |||||||| |||||||| | Sbjct 826593 ATATGACATGT-GGAATGTCACCCCCA-CTGATCTTTGGGACTGGGATGCTCTCAAAGCT 826536 Query 112872 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931 || | | || || || ||| ||| | |||| || ||||| || ||||| Sbjct 826535 GAGATTGCCCAACATGGCCTCCGCAACTCCCTTCTCGTGGCTCCTATGCCGACTGCCTCT 826476 Query 112932 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTG 112991 || | || || | ||||| || ||||||||||| || || || | |||||||| Sbjct 826475 ACATCTCAGATTCTCGGTAACAACGAATGCTTTGAGCCTTATACCTCCAACATCTACTCC 826416 Query 112992 AGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAA 113051 | | ||||| || ||||| ||| |||| ||| | ||| || |||||| Sbjct 826415 CGCCGTGTTCTCGCTGGCGAGTTCCAGATCGTCA------ATC-CCTGGTTG--CTCAAA 826365 Query 113052 ---------GAGATTGGTCTCTGGTCCAAGGATATGAAGGAT---CTCATGGTGAAAGCG 113099 || || || | |||||| | | |||||| || |||| | || Sbjct 826364 GATCTTGTCGACATGGGCTTGTGGTCCGACAACATGAAGAATAGGATCATCGCCGAA--- 826308 Query 113100 GGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACA 113159 ||||| || ||||| || | || || ||||| || || | ||| || Sbjct 826307 GGTGGCTCTATTCAGCGGATCCCCAACATCCCCGATGATATCAAAGCACTCTACAAGACT 826248 Query 113160 GTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 113219 || ||||||||| || || || | | ||||| ||||||||||| |||||| Sbjct 826247 GTGTGGGAAATCTCACAGAGACATATCCTGCAGATGGCTGCAGATCGTGGCGCCTTCATC 826188 Query 113220 GATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCT 113279 || || ||| | | ||| | |||| | || || ||| |||| || | ||| Sbjct 826187 GACCAGTCTCAGTCTCTCAATATCCACATGAAGGAACCTACCATGGGCAAGATCACCTCT 826128 Query 113280 ATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAG 113339 |||||| | | |||||| |||||||| ||||| ||||| ||||| ||| | | | Sbjct 826127 ATGCACTTTGCTGGGTGGAAGCTCGGTCTCAAGACGGGCATGTACTACCTTCGAACGATG 826068 Query 113340 GC 113341 || Sbjct 826067 GC 826066 >seq1 Length=5232100 Score = 105 bits (116), Expect = 8e-18 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || || | ||||| || || ||||| ||||| ||| | | |||| | | Sbjct 3073551 AGTTCCCTGCATCCGCAAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACAAGAGCTC 3073492 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 |||| || ||| || | || ||||| ||| |||||||| |||||| ||| | Sbjct 3073491 CA-CCTTCGCGTCGCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGAT 3073433 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 ||||| ||| | || | |||||||||||||| ||||||||||| || || |||||| Sbjct 3073432 CCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCG 3073374 Query 102288 AACGAGCTTATCTCTCGTGACGAGGG 102313 || || || ||||||||||| ||||| Sbjct 3073373 AATGAACTCATCTCTCGTGATGAGGG 3073348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742012036000