Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-16
seq5 86.0 7e-12
>seq3
Length=4703234
Score = 102 bits (112), Expect = 1e-16
Identities = 336/517 (65%), Gaps = 19/517 (4%)
Strand=Plus/Plus
Query 11491 ACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACA 11550
||||| | | ||||||||||||||| || || || ||||| | ||| | || || |
Sbjct 3585310 ACCTGCACATGACGATCGAAACGACCAGGTCGAAGCAGAGCCTTATCCAAGATTTCAGGA 3585369
Query 11551 CGGTTTGTAGCGGCAATGACTACAATGCCAGT-CTCATTGTCGAAACCGTCCATTTCTGT 11609
| || || || || |||| || | || || ||| | ||| || || || | || |
Sbjct 3585370 TGATTCGTCGCTGCGATGAATATCACACCGGTGCTC-TGGTCAAAGCCATCAAGGTCATT 3585428
Query 11610 GAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACG 11669
|| || ||||| | ||||| || | | ||||| || || ||| |
Sbjct 3585429 CAGCAGTTGGTTAAGAGTCTGG---CGGTGGTAGTTGG---------CATCTCGCGATTG 3585476
Query 11670 CTTCTTACCG---ACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACG 11726
| || ||| ||||| |||| || || ||||| || || ||| ||||| ||
Sbjct 3585477 CCGTTTTCCGCCAACAGCATCAAGTTCGTCAATGAAAACAATGGCTGGTGCCTTGGCTCG 3585536
Query 11727 TGCCTGTTC-GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785
|| || | ||| ||||| || |||||||| || |||||||| || | | ||| |||
Sbjct 3585537 AGCA-GTGCTGAATAGTTCGCGGACACGCTTAGCGCCAACACCAACATATACTTCATCGA 3585595
Query 11786 AGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGA 11845
| | | | || | | ||||||||| || |||||| || | ||| ||||| |
Sbjct 3585596 ACTCAGATCCGGACATGTAGAAGAAGGGAACGCCAGCCTCACCCGCAACGGCACGAGCAA 3585655
Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCAC 11905
| | |||||| || || ||||| | ||| ||| | | |||| ||||| || | |
Sbjct 3585656 GCAAAGTCTTTCCGGTTCCAGGGGGCCCAATGAGCAAGACGCCTTTGGGGAGTCTGCCTC 3585715
Query 11906 CACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965
|| | || || || || || |||||||| ||||||| |||| |||||||||||
Sbjct 3585716 CAAGTTTGTTATACCGTTCGGGGTTTTTGAGGAAATCCACAACATCCTGAAGTTCCTCCT 3585775
Query 11966 TGGCGGAGTCGATACCCTCAACATCGGTGAAACGAGT 12002
|||| ||| || | ||||| ||||| || ||
Sbjct 3585776 TGGCCTCATCGCAGCCTTGTACATCTGTGAAGCGGGT 3585812
>seq5
Length=3199122
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 667463 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 667404
Query 136777 GGGAACA 136783
| || ||
Sbjct 667403 GTGACCA 667397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975631890000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |