Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
seq4 120 4e-22
>seq1
Length=5232100
Score = 138 bits (152), Expect = 1e-27
Identities = 342/505 (68%), Gaps = 22/505 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||||||||| || | | | ||||| |||||
Sbjct 3073042 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATG 3073101
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGG-TGGCACCCCAACTTGTTTGAGGAG 117101
||||| || || || | ||||| ||| |||| | || || || ||
Sbjct 3073102 AAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAAT----AGCAG 3073157
Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161
|| || | || |||| ||||| | | ||||| ||||||||||||||| ||
Sbjct 3073158 GCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGC 3073217
Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221
|| || ||||| || || |||| ||| ||| |||| |||||||| | | ||||
Sbjct 3073218 GCAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTG 3073277
Query 117222 GTGGA--TAGTT-TCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 117278
| || | || | | | | | || | || | | | || ||| || ||| ||
Sbjct 3073278 CTCGACCTCCTTCTTGCTTGGGCGTGTGTTGAGAAGGGAGAAGAGGAGG--CA-GGCGAA 3073334
Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338
|| ||| | |||||||| || || || |||||||| |||||| ||||| |||||
Sbjct 3073335 GTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCAT 3073394
Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCT 117397
|||||| |||||||| | ||| | || | ||| ||| || || |||||| |||||||
Sbjct 3073395 GAGACCGCGCTTCTTGAGCCAGAAGATGGACGC-GAAGGATCCACTGAAGAAAATACCCT 3073453
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACC 117454
| ||| ||||| || | ||| ||| ||||||| | ||| || | ||||| | ||
Sbjct 3073454 CGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTG-GAG-CTCT-TGTCAGATATCC 3073510
Query 117455 ATTTCATTGCCCATTTCGCCTTCTT 117479
||||||||||||| | ||||||||
Sbjct 3073511 ATTTCATTGCCCACTCGGCCTTCTT 3073535
>seq4
Length=3241893
Score = 120 bits (132), Expect = 4e-22
Identities = 352/537 (66%), Gaps = 9/537 (2%)
Strand=Plus/Plus
Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 106839
||||| || ||||||||||| ||||| |||||||||| | |||| | || | |
Sbjct 827314 CTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAATAAGTCACGAGC 827373
Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899
||| | ||||| | || || || || | |||||||| | | | || |||||
Sbjct 827374 GCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTG 827433
Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACAT 106955
||||||||| || |||| || | | || | || | ||| |||||| ||||
Sbjct 827434 CCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGC-CTTGATCAACAT 827492
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
| | || || ||| | || |||||||| || || | ||| | || |||||||
Sbjct 827493 ACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTG 827552
Query 107016 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 107075
| || | ||| | | || | | |||| | || |||||||| || |
Sbjct 827553 TTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTG 827612
Query 107076 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 107135
| || ||||| || ||| | | || || ||||||| || | ||| |||||
Sbjct 827613 CGGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCT 827672
Query 107136 CCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGA 107195
|||| | |||| |||||||| |||||| || || ||| || || ||||||||||
Sbjct 827673 CCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGA 827732
Query 107196 GGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGAC 107253
|||| || | ||||| |||| || |||| ||||| | | ||||||||| | |
Sbjct 827733 GGGTCGGCGAAGCGTGTGTGAA-GTA-CTTGCTCGACATGTAATTGTATGTCTCAATTGC 827790
Query 107254 AGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
||| |||||||| || || ||||||| || ||||||||| | ||||| ||| ||
Sbjct 827791 CTTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGCATGTGTTGTGG 827847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980431262000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |