Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 165 2e-35
seq7 95.1 3e-14
>seq3
Length=4703234
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| |||| ||||||| || |||||||||||
Sbjct 3808481 GTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCGAGCTG 3808422
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || ||||| || ||||||||||| || ||||| ||||| ||
Sbjct 3808421 CTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGAATCTT 3808362
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || |||||||| ||||| ||| || || || |||| |||||| || ||
Sbjct 3808361 CGACTTGACATTGTCAATGGTATCCGATGATTCAACCTCGAGCGTAATCGTCTTGCCGGT 3808302
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | |||||
Sbjct 3808301 CAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| |||| || || | ||||| |||
Sbjct 3808258 ACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCG 3808199
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| ||||| ||||| || ||||| ||||| || ||||| ||
Sbjct 3808198 AGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGG 3808139
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || ||||| ||||| |||||| || || || | ||||||
Sbjct 3808138 ATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTG 3808079
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | |||||
Sbjct 3808078 CCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
Score = 141 bits (156), Expect = 2e-28
Identities = 156/206 (76%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || || || || ||||| |||||||||| ||||||| || |||||||||||
Sbjct 3808937 GTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCGAGCTG 3808878
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || ||||| || || ||||| || ||||| || || ||
Sbjct 3808877 CTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTT 3808818
Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
||||||||| || ||||||| | | || || || || || |||| ||||| ||
Sbjct 3808817 CGACTTGACGTTGTCGATGGTGTCGCTGGAC--TCGACCTCGAGCGTAATGGTCTTGCCG 3808760
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|||| ||| || ||||| | ||||||
Sbjct 3808759 GTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||||||||| ||||| || || || ||||| |||| || || | ||||||||
Sbjct 3808030 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCTTCC 3807971
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | || || ||||| || || ||||| || ||||| ||
Sbjct 3807970 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 3807911
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || || ||||| || ||||| || ||||| | |||||
Sbjct 3807910 ATCTTGGACTTCACATTGTCGATTGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTG 3807851
Query 195112 CCTGT 195116
|| ||
Sbjct 3807850 CCGGT 3807846
>seq7
Length=3010262
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || || ||||| || || || ||||||||| || || | || || |||
Sbjct 2377830 ACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTGAGCGTGCGGCCGTCCTCG 2377889
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || |||||||| || || |||||||||||||| ||
Sbjct 2377890 AGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGGGATGCCTTCTTTGTCCTGG 2377949
Query 195052 ATTTT 195056
|| ||
Sbjct 2377950 ATCTT 2377954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480889238350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |