Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 3e-22
>seq4
Length=3241893
Score = 120 bits (132), Expect = 3e-22
Identities = 419/649 (65%), Gaps = 14/649 (2%)
Strand=Plus/Plus
Query 48113 AGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGG 48172
||| |||| || ||| || ||||| ||||| || | ||| ||||||||||| || ||
Sbjct 827230 AGTGTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGG 827289
Query 48173 ACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCA 48232
||||| | || ||| || | | | | || | |||| || | || || |||||
Sbjct 827290 GCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCA 827349
Query 48233 AAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC 48292
| || |||||| || | || | | |||||| |||||| |||| | || ||
Sbjct 827350 CAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTC 827409
Query 48293 AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCG 48352
||| ||| | | | || || |||||||| || | || || || | ||||||| ||
Sbjct 827410 AAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCG 827469
Query 48353 TTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGAC 48412
||| || || |||||||| | ||| || || |||||||| || || | | ||| ||||
Sbjct 827470 TTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGAT 827529
Query 48413 AATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACT 48472
| ||| || || | ||||| ||||| ||| || || |||| | || |
Sbjct 827530 GAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAAT----CC 827585
Query 48473 AATTGAAAT----ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGG 48528
| || || ||| ||||| ||||| |||| || || | || ||| || || |
Sbjct 827586 GGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGTG 827645
Query 48529 TATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTT 48588
| ||||| || || || || || || || |||||| | || || || |||||||
Sbjct 827646 TGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTT 827705
Query 48589 GCG--GATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCA-TTTCT 48645
| | |||| || || | ||| || | || || || || || | || | || ||
Sbjct 827706 GGGGCGATG--GGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCT 827763
Query 48646 CTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAG 48705
| || | | || ||||| ||||| | ||| || || |||||| || | |
Sbjct 827764 C-GACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGG 827822
Query 48706 ATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTAT 48754
| |||||||| | ||| | ||| || | || ||||||||| |||||
Sbjct 827823 ACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTAT 827871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108448682000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |