Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 1e-12 >seq9 Length=2409284 Score = 87.8 bits (96), Expect = 1e-12 Identities = 261/398 (66%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 |||||||||||| | |||||||||| ||||| ||||| || || ||| Sbjct 2040948 ACGTAAAACTGAGCAAACATGTGGCACGGCGGAAGCGCCATCTTCTTCAGATCCGCCGGG 2040889 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108 ||||| || | || || || || ||||| | || ||||| | | || | | | Sbjct 2040888 TTCCACGCACTCAGTATAATCCGTCTGTCATACGGCTTGTTTTTCAGTTTATCGATGACT 2040829 Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTACTCTGC 30167 | || || || || ||| || | |||||| | || || || | |||||| || Sbjct 2040828 TCGGCCAATTGGTCGACGCCCTGTCCTGTGTAGTCCACA-TCGTGCCCTTTGTACTCGGC 2040770 Query 30168 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30227 || || |||| |||||| || ||||| || || ||||| || ||||| || ||| Sbjct 2040769 GCCAAAGTGCCGCCACTGAAAGCCGTATACAGGCCCCAGATCGCCCTCCTCGTGGTGGGA 2040710 Query 30228 GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCC 30285 || |||| ||| | ||| | | || ||||| ||||||||||||| | ||| | Sbjct 2040709 GAGGCCCACAGAGTCGAGGAAGGCGCGCGACCCGTTCCCGTCCCAGATCTTGATTCCCGC 2040650 Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30345 ||| | |||| | ||| ||| || || ||||||||||| || || || | ||| Sbjct 2040649 TTCACTCAGAGGGAGT--GAGGATGTAGAGCCGCTGACGAACCAGAGGAGTTCGCCTACG 2040592 Query 30346 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 || || | ||||| | || || ||||||||||| Sbjct 2040591 ACAGCGCGCAGGAAGACACGTTTTGTGGTGAGGAGGGG 2040554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617350998650