Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq9 87.8 1e-12
>seq9
Length=2409284
Score = 87.8 bits (96), Expect = 1e-12
Identities = 261/398 (66%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048
|||||||||||| | |||||||||| ||||| ||||| || || |||
Sbjct 2040948 ACGTAAAACTGAGCAAACATGTGGCACGGCGGAAGCGCCATCTTCTTCAGATCCGCCGGG 2040889
Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108
||||| || | || || || || ||||| | || ||||| | | || | | |
Sbjct 2040888 TTCCACGCACTCAGTATAATCCGTCTGTCATACGGCTTGTTTTTCAGTTTATCGATGACT 2040829
Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTACTCTGC 30167
| || || || || ||| || | |||||| | || || || | |||||| ||
Sbjct 2040828 TCGGCCAATTGGTCGACGCCCTGTCCTGTGTAGTCCACA-TCGTGCCCTTTGTACTCGGC 2040770
Query 30168 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC 30227
|| || |||| |||||| || ||||| || || ||||| || ||||| || |||
Sbjct 2040769 GCCAAAGTGCCGCCACTGAAAGCCGTATACAGGCCCCAGATCGCCCTCCTCGTGGTGGGA 2040710
Query 30228 GAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT--TACCCCC 30285
|| |||| ||| | ||| | | || ||||| ||||||||||||| | ||| |
Sbjct 2040709 GAGGCCCACAGAGTCGAGGAAGGCGCGCGACCCGTTCCCGTCCCAGATCTTGATTCCCGC 2040650
Query 30286 TTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACG 30345
||| | |||| | ||| ||| || || ||||||||||| || || || | |||
Sbjct 2040649 TTCACTCAGAGGGAGT--GAGGATGTAGAGCCGCTGACGAACCAGAGGAGTTCGCCTACG 2040592
Query 30346 ACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|| || | ||||| | || || |||||||||||
Sbjct 2040591 ACAGCGCGCAGGAAGACACGTTTTGTGGTGAGGAGGGG 2040554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617350998650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |