Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 >seq3 Length=4703234 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | |||||| ||||| ||| ||| || || || ||||| || || Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| |||| |||| || | |||||| || || || || || ||||||||||||| ||| Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || || | || ||| Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||||||| || || ||||| || || || || |||||||| Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937367866150