Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 6e-34
seq1 150 3e-31
>seq4
Length=3241893
Score = 159 bits (176), Expect = 6e-34
Identities = 622/960 (65%), Gaps = 41/960 (4%)
Strand=Plus/Plus
Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756
|| || |||||| |||||| ||||| | | | | || || ||||| | | ||||| |
Sbjct 826168 TTGAGAGACTGAGACTGGTCGATGAAGGCGCCACGATCTGCAGCCATCTGCAGGATATGT 826227
Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816
||||| |||| |||||||| |||||| ||| | |||||| || || |||| | ||||
Sbjct 826228 CTCTGTGAGATTTCCCACACAGTCTTGTAGAGTGCTTTGATATCATCGGGGATGTTGGGG 826287
Query 212817 ATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAG 212873
|| ||| | ||| || ||| | ||| || | | ||||| ||| |||
Sbjct 826288 ATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCTT---CATGTTGTCGGACCAC 826344
Query 212874 AGGCCCCTGGTCTCCAGGCACTT-GACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
| |||| || || || | ||| || || || ||||| |||||||| || || |
Sbjct 826345 AAGCCCATG-TCGACAAGATCTTTGAGCAACCAGGGATTGACGATCTGGAACTCGCCAGC 826403
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
||| || | | ||| | ||| || || || ||||| | || |||||||| || ||
Sbjct 826404 GAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGCATTCGTTGTTACCGAG 826463
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052
|||||| | || ||| || ||||| |||||||| || || ||| | | || ||
Sbjct 826464 AATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGGAGTTGCGGAGGCCATG 826523
Query 213053 CTCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111
| | | || || || | | |||||||||| ||| ||
Sbjct 826524 TTGGGCAATCTCAGCTTTGA-GAGCATCCCAGTCCCAAAGATCAGTGGGGG--------- 826573
Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171
| || |||||||||||| | || | ||||||| | ||| ||| | || ||
Sbjct 826574 TGACATTCCACATGTCATATTGAAGAATGCCTTGCGAGGCAGGGGAGCCTTCATAGGATT 826633
Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231
||||| ||| | || ||||| |||| ||| || || |||||||| | ||| ||||
Sbjct 826634 CATAGGGTCCAAGTTCTTTGGCAAGCTTGCATGATGCGGTGAGGGCAGCATGGTATATGG 826693
Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGC-ATCATCATG 213290
||||||| || | |||| |||||| | ||||| || ||| ||| ||| ||| |
Sbjct 826694 TTTCAAAGATTTGGATGTTAAGCTTCCTAGCCTCAGGAGACTCGAAAGGCAATCGGAGGG 826753
Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350
|| |||| || || || || || || || |||| ||| ||||| |||||| | | |||
Sbjct 826754 CG-AGGAAGACGTCGGCAAGACCTTGAACGCCGAGGCCAATGGGCCTGTGTTTGAAGTTG 826812
Query 213351 GACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGG 213410
||| | ||| | |||||| ||| || |||||||||||||| |||
Sbjct 826813 CTGTTGCGGGCTTCCGGAACCGGGTAATGATTGACATCAATGATCTTGTTGAGATTGACA 826872
Query 213411 GTGGCCACTTTGGTGA----CATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC 213466
|| | | | || | |||| ||| | || | | | || || || |
Sbjct 826873 GT-GACGGTCTGAACAACCTCATG---CAGTTTCTGGAAGTCGTACTCG--GCATGAGGA 826926
Query 213467 CTG--CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GA 213521
|| |||| || ||||| || | || || ||||| || || ||||||| ||
Sbjct 826927 ATGTCCACATACATGGGCAGAGCTAAAGATGCGAGATTGCACACTGCGACCTCCTCAGGA 826986
Query 213522 GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTC 213581
||| ||||||| |||||||| ||||| |||||| || ||||| || ||||| |||
Sbjct 826987 GAG---GTGTACTGGATGATCTCTGTGCAAAGGTTGGAGCTGCGGATCGTTCCCAGATTC 827043
Query 213582 TGGTGGTTTGACTTTGCG-TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640
| ||| ||| ||||| ||| || ||| ||||| |||||||| ||| || |||||
Sbjct 827044 TTCTGG-TTGCTCTTGCGATTGCAAGCATCTTTGTACAGCATGTATGGGTTTCCAGTCTC 827102
>seq1
Length=5232100
Score = 150 bits (166), Expect = 3e-31
Identities = 343/516 (66%), Gaps = 9/516 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || |||| |||||||||||
Sbjct 3073038 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTC 3073097
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||||||||||| | ||| || ||| | ||| | |||||
Sbjct 3073098 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAATAGCAG 3073157
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| | || |||||| |||||||||||| |||| || |||||| || | || |
Sbjct 3073158 GCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGC 3073217
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
|||| |||| ||||| ||||| | ||| |||| || || || | || ||
Sbjct 3073218 GCAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTG 3073277
Query 48079 CTTAACGCGGGACTC---TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
|| || || || | || ||||| | ||| | |||| | ||||||
Sbjct 3073278 CTCGACCTCCTTCTTGCTTGGGCGTGTGTTGAGAAGG------GAGAAGAGGAGGCAGGC 3073331
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
||||| |||||| ||| || || || |||||| | || |||||| || || ||
Sbjct 3073332 GAAGTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGG 3073391
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||||| || | || ||||||||||| || | |||||| || ||| |||||| || ||
Sbjct 3073392 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACC 3073451
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||| || || || || || || | | |||| | | | ||||||| || |||||
Sbjct 3073452 CTCGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTGGAGCTCTTGTCAGATATCCA 3073511
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
| ||||| || |||||||| |||||| ||
Sbjct 3073512 TTTCATTGCCCACTCGGCCTTCTTGCGGATGCAGGG 3073547
Score = 84.2 bits (92), Expect = 4e-11
Identities = 172/255 (67%), Gaps = 3/255 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||| |||| ||||| | ||||| || ||||||||| || |||||| | |||||
Sbjct 3073673 GTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCCTC 3073732
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
| || || || | || | ||| | ||||||||| ||||| || || || ||
Sbjct 3073733 TGGTATTTGTACCTCGCCGCTAAAGCGCTCGACCAGATTCTCGTTGACGATGCCGTCGGA 3073792
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| || |||||||| ||||| ||| || ||| |||||| | || |||| ||
Sbjct 3073793 TGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTCATCGTCATTGAGCCTCTT 3073852
Query 48604 ---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
|||| | || | ||||||| || || | ||||| | ||||||||||| ||
Sbjct 3073853 GTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAAGCTTC 3073912
Query 48661 TGCTTTTTTGTACAT 48675
|| || ||||||||
Sbjct 3073913 GGCCTTCTTGTACAT 3073927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532217792000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |