Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 8e-33
seq4 118 2e-21
>seq1
Length=5232100
Score = 156 bits (172), Expect = 8e-33
Identities = 346/519 (67%), Gaps = 17/519 (3%)
Strand=Plus/Minus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTAC 25868
||| ||||| | |||||| |||||| ||||| ||||| | | | || |||| | ||
Sbjct 3073547 CCCTGCATCCGCAAGAAGGCCGAGTGGGCAATGAAATGGAT-ATCTGACAAGAGCTCCAC 3073489
Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928
|| | ||| || ||||||||||| ||||| ||||| || || ||||| || || ||
Sbjct 3073488 CTTCGCGTCGCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGATCCTT 3073429
Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988
||| ||||||||||||||||| || || ||||||||| ||| ||| || || ||
Sbjct 3073428 CGCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCGAATGA 3073369
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048
|||||| | || ||||| | |||| || || |||||||| |||| | |
Sbjct 3073368 ACTCATCTCTCGTGATGAGGGCATGCACACCGACTTCGCCTGCCTCCTCTTCTC------ 3073315
Query 26049 CTTGCTC--CACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGA 26105
| | ||| |||| || |||| || ||| | ||||||| ||||| || |
Sbjct 3073314 CCTTCTCAACACACGCCCAAGCAAGAAGGAGGTCGAGCACATCATCACCGAGGCGGTCAA 3073255
Query 26106 GATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAG 26165
||||||| | ||||| | | || |||||| |
Sbjct 3073254 GATCGAGCAAGAGTTCCTCACCGAGGCACTGCCTTGCGCGCTGCTCGGTATGAACTCTGG 3073195
Query 26166 ACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCG 26224
|| ||| |||||||||| |||| || ||||||| ||||| || | || | ||
Sbjct 3073194 TCTGATGTGCCAATACATCGAGTTCGTCGCCGACCGCCTGCTATTGTCTCTCGGCAATC- 3073136
Query 26225 CCAGACTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGG 26282
||| | |||| |||| | ||||| |||||||| ||||| ||||| || |||| ||
Sbjct 3073135 CCAAGGTTTACA--ACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCCGG 3073078
Query 26283 GAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||||||||||| || ||| | ||||| ||||| ||
Sbjct 3073077 CAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCA 3073039
>seq4
Length=3241893
Score = 118 bits (130), Expect = 2e-21
Identities = 308/464 (66%), Gaps = 18/464 (4%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|| |||||||| ||||| ||||| |||||||| |||| || || | ||||| |||
Sbjct 826672 GTGAGGGCAGCATGGTATATGGTTTCAAAGATTTGGATGTTAAGCTTCCTAGCCTCAGGA 826731
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| ||| |||| || || | ||||||||||| || || || || |||| ||
Sbjct 826732 GACTCGAAAGGCAATCGGAGGGCGAGGAAGACGTCGGCAAGACCTTGAACGCCGAGGCCA 826791
Query 221537 ATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594
|||||||||||| | |||| | |||| ||||| || || || ||| ||||| |
Sbjct 826792 ATGGGCCTGTGTTTGAAGTTGCTGTTGCGG--GCTTCCGGAACCGGGTAATGATTGACAT 826849
Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654
| || | |||||||| || | ||||| | | ||| ||||| ||| |||||
Sbjct 826850 CAATGATCTTGTTGAGATTGACAGTGACGGTCTGAACAACCTCATGCAGTTTCTG----- 826904
Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC-AACGCTG 221713
||| | ||||| | | ||| | |||||| | | || || || | |
Sbjct 826905 -GAAGTCGTACTCGGC----ATGAGGAATG--TCCACATACATGGGCAGAGCTAAAGAT- 826956
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|| || || ||||| || ||||| || ||| ||||| ||||||||||| || |||
Sbjct 826957 GCGAGATTGCACACTGCGACCTCCTCAGGAGAGGTGTACTGGATGATCTCTGTGCAAAGG 827016
Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833
||| || ||| || ||||| | || || || |||||||||| ||| || |||
Sbjct 827017 TTGGAGCTGCGGATCGTTCCCAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTG 827076
Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAAT 221877
|| ||||| | || |||||||| |||||| | || ||
Sbjct 827077 TACAGCATGTATGGGTTTCCAGTCTCGGTTTGAGCCTCGAGGAT 827120
Score = 109 bits (120), Expect = 1e-18
Identities = 325/500 (65%), Gaps = 6/500 (1%)
Strand=Plus/Plus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
|| ||||| || |||| | ||| || | || | || |||||| |||||||| |||
Sbjct 827288 GGGCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATC 827347
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
|||| ||| | ||| | || | | || || || ||| | || |||| ||
Sbjct 827348 CACAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGG 827407
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178
|| | || | |||| ||| |||||||| |||||||| |||| ||| | || || ||
Sbjct 827408 TCAAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGG 827467
Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238
|| |||||||| || ||||| || ||| | | |||| ||| ||||| | ||
Sbjct 827468 CGTTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGG 827527
Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGG 222295
| || ||||| || || || || || |||||| || ||| || | || ||
Sbjct 827528 ATGAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGG 827587
Query 222296 TTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355
| | || || || ||||| || ||| ||| |||||||||||||| |||| ||
Sbjct 827588 TG---GACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGT 827644
Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415
||||| ||||||||| || ||||||||| | | | || || || || |||||
Sbjct 827645 GTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATT 827704
Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475
|| | | || | || || || || || || |||||||| ||||| ||
Sbjct 827705 TGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTC 827764
Query 222476 GACATCAGATCGTACGTCTC 222495
||||| || ||| |||||
Sbjct 827765 GACATGTAATTGTATGTCTC 827784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844219472000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |