Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
seq4 107 2e-18
>seq1
Length=5232100
Score = 138 bits (152), Expect = 1e-27
Identities = 342/505 (68%), Gaps = 22/505 (4%)
Strand=Plus/Minus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTCTCGCTCCTTCGCCGAG 65079
|||||||| | ||||||||||||||| | ||||| | || ||| | ||||||| |
Sbjct 3073535 AAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACA-AGAG-CTC-CACCTTCGCGTCG 3073479
Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138
|| ||| | || ||||| ||| |||||||| |||||| || || ||| ||| | ||
Sbjct 3073478 CGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGATCCTTC-GCGTCCAT 3073420
Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198
| ||| | |||||||| ||||||||||| ||||| |||||| |||||||| || ||
Sbjct 3073419 CTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCGAATGAACTCATCTC 3073360
Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258
|| |||||||| | ||| || || ||| || ||| || | | | || |
Sbjct 3073359 TCGTGATGAGGGCATGCACACCGACTTCGCC-TG--CCTCCTCTTCTCCCTTCTCAACAC 3073303
Query 65259 ACCCACTACCGA-AACTA--TCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315
|| | | | | | || | || | |||| | | |||||||| |||| ||| |||
Sbjct 3073302 ACGCCCAAGCAAGAAGGAGGTCGAGCACATCATCACCGAGGCGGTCAAGATCGAGCAAGA 3073243
Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375
|||| || || ||||| || || || ||||||||||||||| ||||| | |
Sbjct 3073242 GTTCCTCACCGAGGCACTGCCTTGCGCGCTGCTCGGTATGAACTCTGGTCTGATGTGCCA 3073183
Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA-CCCA---TTT 65431
||||| |||| || | || || || || || || | |||| |||
Sbjct 3073182 ATACATCGAGTTCGTCGCCGACCGCCTGCT----ATTGTCTCTCGGCAATCCCAAGGTTT 3073127
Query 65432 GGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACT 65491
||||| | || || || ||||| ||||| ||||| | | | || ||||||||||
Sbjct 3073126 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCCGGCAAGACCAACT 3073067
Query 65492 TCTTTGAGAAGCGAGTTGGGGACTA 65516
|||| |||||||| || || |||||
Sbjct 3073066 TCTTCGAGAAGCGCGTCGGTGACTA 3073042
>seq4
Length=3241893
Score = 107 bits (118), Expect = 2e-18
Identities = 349/537 (65%), Gaps = 9/537 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
||||| ||||| | ||||| || | ||||||| || || |||||||| ||| |
Sbjct 827847 CCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAAGACATCGATAAGGCA 827788
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||||||| | | ||||| |||| || |||| ||||| | || |||||||
Sbjct 827787 ATTGAGACATACAATTACATGTCGAGCAAG-TAC-TTCACACACGCTTCGCCGACCCTCT 827730
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||||||| || || ||| || || |||||| |||||||| |||| | |||||||
Sbjct 827729 TCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATCGATATGAAGGAGG 827670
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| | || ||||||| || || | | ||| || ||||| || || |
Sbjct 827669 ACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATCTCCAAAACCGCAG 827610
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| |||||||| || | |||| | | || | | ||| | || ||||
Sbjct 827609 GCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCTACATTGGTGGAACAA 827550
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
|||| || | ||| | || || |||||||| || | ||| || || | ||||
Sbjct 827549 ATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAATACCGCTAGGTATG 827490
Query 75570 TAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| |||||| | ||| ||| || | | || ||||| |||| ||||||||
Sbjct 827489 TTGATCAAG-GCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTGGAGCCATGGCAC 827431
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
||||| | | | |||||||| | || || || || | ||||| | ||| |
Sbjct 827430 GCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAAGAAGTTCGCGCT 827371
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| || | |||| | |||||||||| ||||| ||||||||||| || |||||
Sbjct 827370 CGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGCGTGCAGGAG 827314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569227144000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |