Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq4 107 2e-18 >seq1 Length=5232100 Score = 138 bits (152), Expect = 1e-27 Identities = 342/505 (68%), Gaps = 22/505 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||||||||||||| | ||||| | || ||| | ||||||| | Sbjct 3073535 AAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACA-AGAG-CTC-CACCTTCGCGTCG 3073479 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTAT 65138 || ||| | || ||||| ||| |||||||| |||||| || || ||| ||| | || Sbjct 3073478 CGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGATCCTTC-GCGTCCAT 3073420 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | ||| | |||||||| ||||||||||| ||||| |||||| |||||||| || || Sbjct 3073419 CTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCGAATGAACTCATCTC 3073360 Query 65199 CCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAG 65258 || |||||||| | ||| || || ||| || ||| || | | | || | Sbjct 3073359 TCGTGATGAGGGCATGCACACCGACTTCGCC-TG--CCTCCTCTTCTCCCTTCTCAACAC 3073303 Query 65259 ACCCACTACCGA-AACTA--TCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGG 65315 || | | | | | || | || | |||| | | |||||||| |||| ||| ||| Sbjct 3073302 ACGCCCAAGCAAGAAGGAGGTCGAGCACATCATCACCGAGGCGGTCAAGATCGAGCAAGA 3073243 Query 65316 GTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGA 65375 |||| || || ||||| || || || ||||||||||||||| ||||| | | Sbjct 3073242 GTTCCTCACCGAGGCACTGCCTTGCGCGCTGCTCGGTATGAACTCTGGTCTGATGTGCCA 3073183 Query 65376 GTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCA-CCCA---TTT 65431 ||||| |||| || | || || || || || || | |||| ||| Sbjct 3073182 ATACATCGAGTTCGTCGCCGACCGCCTGCT----ATTGTCTCTCGGCAATCCCAAGGTTT 3073127 Query 65432 GGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACT 65491 ||||| | || || || ||||| ||||| ||||| | | | || |||||||||| Sbjct 3073126 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCCGGCAAGACCAACT 3073067 Query 65492 TCTTTGAGAAGCGAGTTGGGGACTA 65516 |||| |||||||| || || ||||| Sbjct 3073066 TCTTCGAGAAGCGCGTCGGTGACTA 3073042 >seq4 Length=3241893 Score = 107 bits (118), Expect = 2e-18 Identities = 349/537 (65%), Gaps = 9/537 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| | ||||| || | ||||||| || || |||||||| ||| | Sbjct 827847 CCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAAGACATCGATAAGGCA 827788 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||||||| | | ||||| |||| || |||| ||||| | || ||||||| Sbjct 827787 ATTGAGACATACAATTACATGTCGAGCAAG-TAC-TTCACACACGCTTCGCCGACCCTCT 827730 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||| || || ||| || || |||||| |||||||| |||| | ||||||| Sbjct 827729 TCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATCGATATGAAGGAGG 827670 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| | || ||||||| || || | | ||| || ||||| || || | Sbjct 827669 ACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATCTCCAAAACCGCAG 827610 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| || | |||| | | || | | ||| | || |||| Sbjct 827609 GCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCTACATTGGTGGAACAA 827550 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 |||| || | ||| | || || |||||||| || | ||| || || | |||| Sbjct 827549 ATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAATACCGCTAGGTATG 827490 Query 75570 TAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | |||||| | ||| ||| || | | || ||||| |||| |||||||| Sbjct 827489 TTGATCAAG-GCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTGGAGCCATGGCAC 827431 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 ||||| | | | |||||||| | || || || || | ||||| | ||| | Sbjct 827430 GCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAAGAAGTTCGCGCT 827371 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | || | |||| | |||||||||| ||||| ||||||||||| || ||||| Sbjct 827370 CGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGCGTGCAGGAG 827314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569227144000