Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 203 4e-47
seq5 93.3 6e-14
seq8 86.0 8e-12
>seq3
Length=4703234
Score = 203 bits (224), Expect = 4e-47
Identities = 484/722 (67%), Gaps = 15/722 (2%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || ||||| ||||||| || || ||||| || || ||||| |||| ||| |||
Sbjct 1807869 ACCGTCCCTGCCTACTTCAACGACAACCAGCGACAAGCCACCAAGGATGCTGGTGCCATT 1807928
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| || | |||||||| || || || || || || || || ||||||
Sbjct 1807929 GCTGGCCTCAACGTCCTCCGCATTATCAACGAGCCCACGGCCGCCGCTATCGCCTATGGT 1807988
Query 195839 CT-GGACAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGG 195894
|| ||| | | ||| |||| | | ||||| | |||| || | ||||||||
Sbjct 1807989 CTCGGATCCGGA-AAGTCCGAAAAGGAGCGGAATGTTCTCATCTACGACTTGGGTGGTGG 1808047
Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954
|| || ||||| || || || | ||| | || ||| | ||| || ||||| || ||
Sbjct 1808048 CACTTTCGATGTGTCCCTGCTGCACATTCAGGGAGGTGTCTTCACCGTGAAGGCCACCGC 1808107
Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGA 196014
|||||| || || | |||||| ||||||||||| | ||| || ||| || |
Sbjct 1808108 TGGTGACACCCACTTGGGTGGTCAAGATTTCGATACCAATCTGCTTGATCACTTCAAGAA 1808167
Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCT 196074
|||||| |||| ||||| ||| | || || || | | || || ||||| ||
Sbjct 1808168 GGAGTTCACCAAGAAGACGAAGAAGGATCTCTCAGGCGATGCCCGAGCCCTCCGTCGTCT 1808227
Query 196075 TAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTT 196132
|||| || || || ||||| || ||||| || || | ||| | ||||| | |||
Sbjct 1808228 CCGGACCGCTTGCGAGCGTGCTAAGCGAACGCTTTC--CAACGCTACGCAAACCACTGTT 1808285
Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTTT 196191
||||| |||||| | || || || || ||| | | |||| || |||||||| |||||
Sbjct 1808286 GAGATCGATTCGCTCTTCGATGGTGAGGATTTCAACTCCAAC-ATCACCCGTGCTCGTTT 1808344
Query 196192 TGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249
|| || || ||| | | || | || | | | | || ||||| || || |
Sbjct 1808345 CGAGGACTTGAACGCCAAGGCTTTCAACGGCA--CTCTCCAGCCCGTTGAGCAGGTGTTG 1808402
Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
|| || || || ||| ||||||||||| || || ||||| || || || |||
Sbjct 1808403 AAGGATGCCAACATCTCAAAGGACAAGGTTGATGAGATCGTGCTTGTTGGTGGTTCTACC 1808462
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
|||||||| | ||| ||| || | ||| || |||||| || | | | ||
Sbjct 1808463 CGTATTCCTAGGATACAAAAGCTCCTTAGCGACTGCTTCAACGGCAAGAAGCTCGAGAAG 1808522
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| ||||| || ||||| ||||| || ||||| ||||||| |||||||||
Sbjct 1808523 AGCATCAACCCCGATGAGGCTGTTGCCTATGGCGCTGCCGTCCAGGCTGGTATTCTCTCG 1808582
Query 196430 GG 196431
||
Sbjct 1808583 GG 1808584
Score = 154 bits (170), Expect = 2e-32
Identities = 255/362 (70%), Gaps = 6/362 (2%)
Strand=Plus/Minus
Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689
||||||| ||||| || | ||||| ||| |||||||||||| || || | | |
Sbjct 447705 CTCCCGAGGAAATCTCCGCCATGGTTTTGGGCAAGATGAAGGAGGTCGCCGAGGCCTACC 447646
Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749
| || | || || || | |||||||| || || || || ||||||| || | || |
Sbjct 447645 TTGGAGAGACCGTCAAGAACGCAGTTGTTACCGTCCCCGCCTACTTCAACGACGCTCAGC 447586
Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809
| || || |||||||| | | ||||| ||||| || ||| | | |||| |
Sbjct 447585 GCGCCGCTACCAAGGACGCCGGAACCATTGCCGGTCTTAATGTTCTCCGCGTGGTCAACG 447526
Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAG-GACGAAGA--TAAAA 195866
|||| || || || || | || || ||||| |||||| ||| | |||| || |
Sbjct 447525 AACCCACCGCTGCCGCTCTGGCCTACGGTCTTGACAAG-ACAGGTGACGCCGAACGCCAG 447467
Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926
|| ||| | ||| |||||||| ||||| || || ||||| || | |||| | | ||||
Sbjct 447466 AT-TATCG-TCTACGATCTCGGAGGTGGAACTTTCGATGTGTCGATCCTCACTCTCGAAG 447409
Query 195927 GTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCG 195986
| ||| | |||||||| ||||||| |||||||| |||||||| |||||||| |||||||
Sbjct 447408 GCGGTGTTTTCGAAGTTCAGGCTACCGCTGGTGACACTCATCTTGGTGGTGAGGATTTCG 447349
Query 195987 AT 195988
||
Sbjct 447348 AT 447347
Score = 154 bits (170), Expect = 2e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| || || ||| | || || || || ||||| |||||||| || || ||
Sbjct 3808050 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTGGAATCATCG 3808109
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| ||| | || | ||||| || || ||||| ||||| || || |||||
Sbjct 3808110 GATACCATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAA 3808169
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||||| || || ||||| || ||||| || ||||| || ||||| | || ||||||
Sbjct 3808170 CAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTATCCGACTACAAC 3808229
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || ||||||||||| || ||||| || || | || || ||||||
Sbjct 3808230 ATCCAGAAGGAGTCTACACTCCACCTCGTCCTTCGTCTCCGTGGTGGT 3808277
Score = 150 bits (166), Expect = 2e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||| | || || || || || || ||||||||||| |
Sbjct 3808273 GTGGTATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTTGAAT 3808332
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || || || || || || |||| | |||||||| || ||||| |||||||| || |
Sbjct 3808333 CATCGGATACCATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGG 3808392
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
|||| || || || || || || || || ||||| ||||| || || || ||| | || |
Sbjct 3808393 ATCAACAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGACT 3808452
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || |||||||| || |||||| | || || | || || ||||||
Sbjct 3808453 ACAACATCCAGAAGGAGTCCACCCTACACTTGGTGCTCCGTCTACGCGGTGGT 3808505
Score = 149 bits (164), Expect = 8e-31
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||||||||| || || || || || || || || || || |||||||| ||||
Sbjct 3808729 GTGGTATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATTACGCTCGAGGTCGAGT 3808788
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| ||||| ||||| ||| |||| | ||||| || || ||||| ||||| ||||| |
Sbjct 3808789 CCAGCGACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCGG 3808848
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || || || || || ||||| ||||| || || || ||| | ||||
Sbjct 3808849 ACCAGCAGCGGCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGATT 3808908
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
||||| |||| ||||| || || || ||| | || ||
Sbjct 3808909 ACAACATTCAGAAGGAATCGACCCTGCACTTGGTGCT 3808945
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || |||||||||||||| ||||| || ||||||||||| || | || ||
Sbjct 3807846 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCTGACACAATCGACAATGTGAAGTCC 3807905
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || ||||| ||||| || || || ||||| || | || || || || ||
Sbjct 3807906 AAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAG 3807965
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| |||||||| || ||||| | || |||||| | || |||||||| ||||| |||
Sbjct 3807966 CAGCTGGAAGATGGCCGCACCCTATCCGACTACAACATCCAGAAGGAGTCGACTCTTCAC 3808025
Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088
|| || || | || || |||||
Sbjct 3808026 CTCGTCCTTCGTCTCCGCGGTGG 3808048
>seq5
Length=3199122
Score = 93.3 bits (102), Expect = 6e-14
Identities = 160/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608
|| || || ||||| |||| |||| | || || ||||||||||| | || ||
Sbjct 2575983 ATTCCCCGCGGTGCCATTCTGTCCGGCCCACCCGGAACTGGTAAAACATTGCTTGCCAAA 2576042
Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGGC---GAGTTTCATC 198665
|||| ||||| || ||| | |||||||| |||||| | | |||| |||||| |
Sbjct 2576043 GCTACAGCGGGGGAGTCGGGAGTCCCCTT-CTTCAGCG-TGAGCGGTTCAGAGTTTGTT- 2576099
Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725
|||||||| || ||||| |||||| ||| || || || || || | | | || ||| ||
Sbjct 2576100 GAGATGTTTGTCGGTGTCGGTGCTTCGCGTGTACGAGATCTGTTCGCGAATGCGCGT-AA 2576158
Query 198726 AATCAA-CCATGTATCATCTTCATTGATGAGATTGACGCTGTTGG 198769
| || || || |||||||||||||| || || ||||| ||||
Sbjct 2576159 GAGCACTCCCTGCATCATCTTCATTGACGAAATCGACGCCATTGG 2576203
>seq8
Length=2851179
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||||| || || || ||||||||||||||||| ||||| ||
Sbjct 895016 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCG 895075
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCA 171953
||||| ||||| || | || ||||||| ||
Sbjct 895076 GACACCATCGACAATGTGAAGTCCAAGATCCA 895107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861988836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |