Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9 111 5e-19 seq4 98.7 3e-15 >seq9 Length=2409284 Score = 111 bits (122), Expect = 5e-19 Identities = 193/279 (69%), Gaps = 4/279 (1%) Strand=Plus/Minus Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649 || ||||||||||| ||||||||| | || || || ||||| || || | ||| || Sbjct 469954 AACCGACGCTGAATGTAACCAGTTTCGGCAGTCTTGACTGCTGTGTCGATCAAACCTTCA 469895 Query 302650 CGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGC 302707 ||||| |||| || ||||| || | ||| || |||| ||||| | | | | ||| Sbjct 469894 CGACCGGCCATGGCGTGGAAAAAGAACTCGGTTGGGGTC--AGCCCACGCAGATAAGAGT 469837 Query 302708 TCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCC 302767 |||| | ||| || || | ||| || |||| ||| |||||| ||||| || | ||||| Sbjct 469836 TCTCGATGAACCCTCGAGACTCTGGAGAATAATCGTCCTTGGTGAAGTGGGGTAAGGTCC 469777 Query 302768 TGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAA 302827 || || | | ||| |||| ||||| ||| || ||| |||||||| | || || Sbjct 469776 GGTACTTAAATCCGAATGGAATACGGGCTCCTTCCACGGCTTGCTGTCCAACAAGCGCAA 469717 Query 302828 TCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 |||||| || || || | | | ||||| || |||| Sbjct 469716 CCATCTGTGAGATGTTGACAGTAGAACCCTTAGAACCAG 469678 Score = 107 bits (118), Expect = 6e-18 Identities = 131/177 (74%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | |||||| |||||||| ||||| || ||||| || || |||||||| ||| Sbjct 369619 GCTCCGTGCGCAATCATGCAATCACGTTCCATCTCTCCGAACCGCAGGCCACCATCACGA 369560 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 |||||||| ||| | ||||| || |||||| | || |||||| |||| | || Sbjct 369559 GCCCTACCTTCGACGGGCTGGCGTGTGAGAATCTGCAATGGACCG--CGAGCACGTGCGT 369502 Query 251605 TG--CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 | || || | ||||||||| | |||||||||||| ||| || || | ||||| Sbjct 369501 GGATTTTGTCGTCGACCATATGCCTCAGACGCTGGTAGTATGTCGGTCCTAAGAAGA 369445 >seq4 Length=3241893 Score = 98.7 bits (108), Expect = 3e-15 Identities = 340/530 (64%), Gaps = 3/530 (1%) Strand=Plus/Plus Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | ||| ||||||||||| || || | ||| | || || | || |||| Sbjct 827381 TCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTGCCATGGC 827440 Query 156030 TCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAGCA 156086 ||||| || || ||||| ||| | | ||||| || ||||| ||||||| ||| Sbjct 827441 TCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCTTGATCAACATACCTAGCG 827500 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || || ||| |||||| |||||||| || | ||| || || |||||||| ||||| | | Sbjct 827501 GTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTGTTCCACCA 827560 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 || | | || | | |||| || | || || |||||||| |||| ||| Sbjct 827561 ATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTGCGGTTTTG 827620 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266 || || ||||| ||| | || | | || || || || || || | ||| Sbjct 827621 GAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATA 827680 Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326 | || |||| || | ||| || ||| || || || ||||| || || || Sbjct 827681 TCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGC 827740 Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGA 156386 | || || | || ||||| | ||||| |||| ||||||||| | ||| || | Sbjct 827741 GAAGCGTGTGTGAAGTACTTGCTCGACATGTAATTGTATGTCTCAATTGCCTTATCGATG 827800 Query 156387 TTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATC 156446 | || || || | || || || | |||| ||| || || |||||||| |||| Sbjct 827801 TCTTCGCCATGTATGCCGACGGACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATT 827860 Query 156447 ACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 | | || || || ||||||| |||||| ||||| || || ||||| Sbjct 827861 TTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGAGTCTTGAAACCGAA 827910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816657116850