Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq9 111 5e-19
seq4 98.7 3e-15
>seq9
Length=2409284
Score = 111 bits (122), Expect = 5e-19
Identities = 193/279 (69%), Gaps = 4/279 (1%)
Strand=Plus/Minus
Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649
|| ||||||||||| ||||||||| | || || || ||||| || || | ||| ||
Sbjct 469954 AACCGACGCTGAATGTAACCAGTTTCGGCAGTCTTGACTGCTGTGTCGATCAAACCTTCA 469895
Query 302650 CGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGC 302707
||||| |||| || ||||| || | ||| || |||| ||||| | | | | |||
Sbjct 469894 CGACCGGCCATGGCGTGGAAAAAGAACTCGGTTGGGGTC--AGCCCACGCAGATAAGAGT 469837
Query 302708 TCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCC 302767
|||| | ||| || || | ||| || |||| ||| |||||| ||||| || | |||||
Sbjct 469836 TCTCGATGAACCCTCGAGACTCTGGAGAATAATCGTCCTTGGTGAAGTGGGGTAAGGTCC 469777
Query 302768 TGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAA 302827
|| || | | ||| |||| ||||| ||| || ||| |||||||| | || ||
Sbjct 469776 GGTACTTAAATCCGAATGGAATACGGGCTCCTTCCACGGCTTGCTGTCCAACAAGCGCAA 469717
Query 302828 TCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
|||||| || || || | | | ||||| || ||||
Sbjct 469716 CCATCTGTGAGATGTTGACAGTAGAACCCTTAGAACCAG 469678
Score = 107 bits (118), Expect = 6e-18
Identities = 131/177 (74%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||| |||||||| ||||| || ||||| || || |||||||| |||
Sbjct 369619 GCTCCGTGCGCAATCATGCAATCACGTTCCATCTCTCCGAACCGCAGGCCACCATCACGA 369560
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|||||||| ||| | ||||| || |||||| | || |||||| |||| | ||
Sbjct 369559 GCCCTACCTTCGACGGGCTGGCGTGTGAGAATCTGCAATGGACCG--CGAGCACGTGCGT 369502
Query 251605 TG--CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
| || || | ||||||||| | |||||||||||| ||| || || | |||||
Sbjct 369501 GGATTTTGTCGTCGACCATATGCCTCAGACGCTGGTAGTATGTCGGTCCTAAGAAGA 369445
>seq4
Length=3241893
Score = 98.7 bits (108), Expect = 3e-15
Identities = 340/530 (64%), Gaps = 3/530 (1%)
Strand=Plus/Plus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | ||| ||||||||||| || || | ||| | || || | || ||||
Sbjct 827381 TCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTGCCATGGC 827440
Query 156030 TCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACATACCGAGCA 156086
||||| || || ||||| ||| | | ||||| || ||||| ||||||| |||
Sbjct 827441 TCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCTTGATCAACATACCTAGCG 827500
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| || ||| |||||| |||||||| || | ||| || || |||||||| ||||| | |
Sbjct 827501 GTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTGTTCCACCA 827560
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|| | | || | | |||| || | || || |||||||| |||| |||
Sbjct 827561 ATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTGCGGTTTTG 827620
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
|| || ||||| ||| | || | | || || || || || || | |||
Sbjct 827621 GAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATA 827680
Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326
| || |||| || | ||| || ||| || || || ||||| || || ||
Sbjct 827681 TCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGC 827740
Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGA 156386
| || || | || ||||| | ||||| |||| ||||||||| | ||| || |
Sbjct 827741 GAAGCGTGTGTGAAGTACTTGCTCGACATGTAATTGTATGTCTCAATTGCCTTATCGATG 827800
Query 156387 TTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATC 156446
| || || || | || || || | |||| ||| || || |||||||| ||||
Sbjct 827801 TCTTCGCCATGTATGCCGACGGACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATT 827860
Query 156447 ACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496
| | || || || ||||||| |||||| ||||| || || |||||
Sbjct 827861 TTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGAGTCTTGAAACCGAA 827910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816657116850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |