Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4 122 8e-23
seq3 116 3e-21
seq7 82.4 7e-11
>seq4
Length=3241893
Score = 122 bits (134), Expect = 8e-23
Identities = 409/624 (66%), Gaps = 27/624 (4%)
Strand=Plus/Plus
Query 139314 GTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACA 139373
||| || || ||||| ||||| || |||| | ||| | |||| | || || ||
Sbjct 827233 GTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCA 827292
Query 139374 CATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAA 139433
|||||| | ||| |||||||| ||| |||||| |||||||||| ||||||||||||||
Sbjct 827293 CATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAA 827352
Query 139434 AGCGAACAGCAAATC----GCGCG-CCTTCTTATCTTCCGAACCCATGTTACGTTTC--A 139486
||| | | || || ||||| ||||| |||| ||||| | | || | |
Sbjct 827353 CGCGTAAAATAAGTCACGAGCGCGAACTTCT--TCTT----TGCCATGATTC-TTCCGGA 827405
Query 139487 TGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTT 139546
|| |||||| | |||||||| ||||||||||| ||||| |||||||| | || |||
Sbjct 827406 GGTCAAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTG 827465
Query 139547 TCCGT---TTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCG 139603
||| ||||| |||||||| || | | | | ||| ||| | || || | ||| |
Sbjct 827466 GGCGTTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAG 827525
Query 139604 GCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGAC 139661
| |||||| ||| || || || || | || ||| || | | ||| || |
Sbjct 827526 GGATGAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCC--CCGGTAGCACGAAT 827583
Query 139662 GTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-- 139719
|| ||||| | || || ||||| | |||||| || | |||| || |
Sbjct 827584 CCGGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCA--CGTCTTC 827641
Query 139720 AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAA 139779
| ||| || || || || |||||||| |||| ||| || || ||||| || ||
Sbjct 827642 AGTGTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGAC 827701
Query 139780 AGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTG 139838
| ||| || | || || || || || || || ||||| ||||| | |||
Sbjct 827702 ATTTGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTG 827761
Query 139839 TTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGAC 139898
||||||| | | ||| || || || || | | || || || || || |||||
Sbjct 827762 -CTCGACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGAC 827820
Query 139899 AGAGACTCGCATCAGCATATGTTG 139922
|| || ||||||||||| |||||
Sbjct 827821 GGACACACGCATCAGCATGTGTTG 827844
>seq3
Length=4703234
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || ||||||||||| || || ||| |
Sbjct 3808734 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATTACGCTCGAGGTCGAGTCCAGC 3808793
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3808794 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 3808853
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| || || || ||||| || || ||| | || ||||| |||
Sbjct 3808854 CAGCGGCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGATTACAAC 3808913
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||||||||| || ||||||||| | || |||| || ||
Sbjct 3808914 ATTCAGAAGGAATCGACCCTGCACTTGGTGCTCCGTCTGCGTGGCGG 3808960
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || ||||||||||| || ||| | |
Sbjct 3808278 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTTGAATCATCG 3808337
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || ||||| ||||||
Sbjct 3808338 GATACCATTGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCAA 3808397
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| || || ||| | || || || |||
Sbjct 3808398 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGACTACAAC 3808457
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || |||||||||||| | || | ||||| ||
Sbjct 3808458 ATCCAGAAGGAGTCCACCCTACACTTGGTGCTCCGTCTACGCGGTGG 3808504
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || || |||||||| || ||| | |
Sbjct 3808050 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTGGAATCATCG 3808109
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || || || ||||| ||||||
Sbjct 3808110 GATACCATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAA 3808169
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| || || || ||||| |||||| | | | | || || || |||
Sbjct 3808170 CAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTATCCGACTACAAC 3808229
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| || ||||| |||
Sbjct 3808230 ATCCAGAAGGAGTCTACACTCCAC 3808253
>seq7
Length=3010262
Score = 82.4 bits (90), Expect = 7e-11
Identities = 109/147 (74%), Gaps = 6/147 (4%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||||||||| || || ||||| ||||| ||| | ||||| || || ||
Sbjct 2377954 AAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAACAGCGTCTCATCTTCGCGGGCAAG 2377895
Query 24848 CAGCTGGAGGATTCGAGAAACATG-TCA--GATTATAACATTCAAAAGGAATCGACACTA 24904
||||| ||||| || | || | ||| ||||| ||||| || ||||| ||||| ||
Sbjct 2377894 CAGCTCGAGGA--CG-GCCGCACGCTCAGCGATTACAACATCCAGAAGGAGTCGACGCTG 2377838
Query 24905 CACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| |||| | || |||| || |||
Sbjct 2377837 CATCTGGTCCTTCGTCTGCGTGGCGGC 2377811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897318814000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |