Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 seq12 87.8 1e-12 >seq3 Length=4703234 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| ||| | |||||||| |||||||| |||| ||| | | Sbjct 3808734 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATTACGCTCGAGGTCGAGTCCAGC 3808793 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || |||||| ||||| || ||| | || ||| || Sbjct 3808794 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 3808853 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||||| || ||||| || || | | |||| | | ||||||||| Sbjct 3808854 CAGCGGCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGATTACAAC 3808913 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| || ||||| || ||||| ||||| | | ||||| || ||| Sbjct 3808914 ATTCAGAAGGAATCGACCCTGCACTTGGTGCTCCGTCTGCGTGGCGGA 3808961 >seq12 Length=1273234 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/99 (81%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 34527 GTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGC 34584 |||||||||||| |||||||||||||||||||| || |||| ||||| |||| |||| Sbjct 595446 GTTGACGATGACGGTCTTGATGCCGTTGCCCTTGCCCTCGATCTTGGACTGCAG--GCGC 595503 Query 34585 GGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 ||| |||||||| ||||| | ||| | |||| |||| Sbjct 595504 TCCATCTTGTAGCGATAGAAGGGGTCGGTGACATCGCGG 595542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841348424650