Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 138 2e-26 seq14 118 2e-20 seq8 114 2e-19 seq21 107 3e-17 seq4 96.9 5e-14 >seq1 Length=5232100 Score = 138 bits (152), Expect = 2e-26 Identities = 183/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| | ||| || || || |||||| |||||| |||||||||||||| | | Sbjct 3073025 TGACGCCAGACTTCTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 3073084 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| |||||| | ||| ||||||| | ||| ||| |||| Sbjct 3073085 AGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGA 3073144 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | ||| |||||||||||||||||||| || ||||| |||||||| || | | ||||| Sbjct 3073145 GAGACAATAGCAGGCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCA 3073204 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | |||| ||||| ||||| | |||| ||| ||||||| |||||||| ||| |||| Sbjct 3073205 TACCGAGCAGCGCGCAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCT 3073264 Query 794131 CGATGATGATCTGC 794144 || ||||||| ||| Sbjct 3073265 CGGTGATGATGTGC 3073278 Score = 105 bits (116), Expect = 1e-16 Identities = 152/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| |||| ||| ||||| | ||||| || |||| ||||| ||||||||| Sbjct 3073728 GCCTCTGGTATTTGTACCTCGCCGCTAAAGCGCTCGACCAGATTCTCGTTGACGATGCCG 3073787 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| |||||||| |||||||||||||| || ||| ||||| ||||| ||||| Sbjct 3073788 TCGGATGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTCATCGTCATTGAGC 3073847 Query 796270 GA---GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | ||||| | ||| | ||| |||| ||| ||||||||||| ||||| Sbjct 3073848 CTCTTGTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAA 3073907 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTT 796360 || |||||||| |||||||| | ||| | | ||| Sbjct 3073908 GCTTCGGCCTTCTTGTACATTTGCCAGACCTGTT 3073941 Score = 89.7 bits (98), Expect = 8e-12 Identities = 114/155 (74%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 |||||||||||||| ||||||||||||||||| ||||||| ||| || ||| Sbjct 3073384 AGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAG 3073443 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 || || |||||||| ||||||||| | || || ||| || || ||| || | | | Sbjct 3073444 AAAATACCCTCGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTG--GAGCTCTTGT 3073501 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531 | | ||||| ||||| |||||||| ||||| || Sbjct 3073502 CAGAT-ATCCATTTCATTGCCCACTCGGCCTTCTT 3073535 >seq14 Length=1000850 Score = 118 bits (130), Expect = 2e-20 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||||||||||||| | || |||||| | || |||||||| || |||||| Sbjct 372311 GCTGCCAACTACCTCGACATCAAGGCACTACTCGATGTCGGATGCAAGACGGTCGCCAAC 372370 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| ||||| || ||||| ||||| || || ||| || ||| Sbjct 372371 ATGATCAAGGGCAAGTCCCCCGACGAGATCCGAAAGACGTTCAATATCCAGAACG 372425 >seq8 Length=2851179 Score = 114 bits (126), Expect = 2e-19 Identities = 363/551 (66%), Gaps = 15/551 (3%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 || ||||| ||| | | || |||||||||||||| || ||| || || || |||||| Sbjct 1284792 TCGATCTTTGAGTCCGGGTCACTGGCGCTCATCTTTCCTCCCT--GT-AGTCCAGGCACC 1284736 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | ||||| | || || ||||| ||| || | | |||||| || ||| Sbjct 1284735 ATGGGGTTCATGAGATGTGCGCGCTCCTTGTATCCAATCTTAGGCAGGACTTCCTTCGCC 1284676 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | ||||||||||| | |||||| ||||| ||||| | || || ||||||| |||| Sbjct 1284675 AGCGCAAAGATCTTCCTCTGGTCCACGCCGCCGAACTGCACATCCACATCGAGGTACTGC 1284616 Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCAT 2411624 ||||| || |||||||| || ||||||| || ||| | ||||| || | || | Sbjct 1284615 TCGTCCAGCGCCTGCATAAGTGGGTAGATCAGCCCGCTCAACGGCGCATTCTCCGT-CTG 1284557 Query 2411625 CTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACGCGCGCCGTCAGG 2411682 |||||| |||| ||| |||||| || ||| ||||| || ||||| | || || Sbjct 1284556 CTTGACGACCTCCGCGCCGGCCTTCTTCGCGTCGTGC--TCGCTCACGATGGATGTAAGT 1284499 Query 2411683 CGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCG 2411742 ||||| || || | |||| | | ||| | | ||| ||| | || || || Sbjct 1284498 CGCAATAGATCCATGAAGTAGTCTGGTTTGAGCTCGAAGTCGGATCCGAGGACGAACTCT 1284439 Query 2411743 AGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGC-AAAC--TCGTAC 2411799 || | || |||| | | || |||| || ||||| | |||| | |||| Sbjct 1284438 AGCTTGTTGGTCGAGACGTTGACGGCGTGCAGCAGAGCGGTGATGACGAAACGGTAGTAC 1284379 Query 2411800 CAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGC 2411859 |||| ||| || |||||| || |||| ||| |||||||||| | |||| Sbjct 1284378 --TCGGC-GCGGAACTTGACGAGTTCAATGGGCGCTTTGAGATTGTCGAGGAAGCCGTGG 1284322 Query 2411860 ACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAG 2411919 | ||| || | ||||||| | || || || || || ||||| || | || | || | | Sbjct 1284321 ATGTCCGCGAGGAGGATCTTGACGCGGCAACCTGCTTGGAGGAATTGTGCGATCTTGAGG 1284262 Query 2411920 ATGGGCACAAA 2411930 | ||||||||| Sbjct 1284261 ACGGGCACAAA 1284251 >seq21 Length=491942 Score = 107 bits (118), Expect = 3e-17 Identities = 273/412 (66%), Gaps = 15/412 (4%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 |||||||||||||| || || | | ||||| ||| || | || ||||| || | Sbjct 118805 GACGGCAACATGCCGCACGTCATCATCTCGGGCATGCCTGGAATTGGAAAGACGACCTCC 118864 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 || ||||| ||||| | | |||||| || | | |||||||||||||| ||| Sbjct 118865 ATTCTCTGCCTCGCGCGGCAGATGCTGGGCGACGCATACAAGGAGGCCGTGCTCGAGCTC 118924 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC--ATCAAGCATCACGCTT 2019180 || || || || |||||||| | || ||||| | ||||| |||||| |||| Sbjct 118925 AACGCCTCCGATGAGCGCGGTATAGATGTCGTTAG--GAATCGAATCAAG-----GGCTT 118977 Query 2019181 CGAAAAGAA-----TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGC 2019235 | | |||| || || || || ||| | || ||| | |||| || ||||| || Sbjct 118978 TGCACAGAAGAAGGTCACACTACCACCGGGCAGACAGAAGCTTGTCATTCTGGATGAAGC 119037 Query 2019236 CGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAA 2019295 ||| || | ||| | || || ||||| | ||| ||| ||||| | |||| Sbjct 119038 GGACAGCATGACGAGCGGTGCGCAACAGGCGTTGCGAAGGACGATGGAGATTTACAGTGC 119097 Query 2019296 CACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAG 2019355 ||||| || ||||| | || ||||| ||| | | ||||||| | || || Sbjct 119098 TACGACCCGATTTGCATTCGCATGCAATCAATCGAACAAGATCATCGAGCCTCTACAATC 119157 Query 2019356 CCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCG-CCGC 2019406 ||||| || ||| | |||| ||| ||||| || ||||||||| ||| |||| Sbjct 119158 GCGTTGTGCTATCCTCCGCTATGCCCGCCTTACAGACGCCCAGGTCGTCCGC 119209 >seq4 Length=3241893 Score = 96.9 bits (106), Expect = 5e-14 Identities = 179/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || || ||||| | || || | ||| |||| || ||||| || | || ||||| ||| Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||| || || || | | |||||| || | || || | | ||| | | || Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCA 827602 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | |||||||| | |||||| | ||||| || || |||||||||||| Sbjct 827603 ATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCG 827662 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCG-CGCCGTGCC 2073779 || ||| ||||||| || | || ||||| || || |||| ||||| | || || Sbjct 827663 ATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTG-GGGCGATGGGGTCCC 827721 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 ||||||||||| || |||| Sbjct 827722 CGCATTGAAGAGGGTCGGCG 827741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916241081271950