Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 2e-26
seq14 118 2e-20
seq8 114 2e-19
seq21 107 3e-17
seq4 96.9 5e-14
>seq1
Length=5232100
Score = 138 bits (152), Expect = 2e-26
Identities = 183/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||| | ||| || || || |||||| |||||| |||||||||||||| | |
Sbjct 3073025 TGACGCCAGACTTCTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 3073084
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||| |||||| | ||| ||||||| | ||| ||| ||||
Sbjct 3073085 AGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGA 3073144
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| ||| |||||||||||||||||||| || ||||| |||||||| || | | |||||
Sbjct 3073145 GAGACAATAGCAGGCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCA 3073204
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| |||| ||||| ||||| | |||| ||| ||||||| |||||||| ||| ||||
Sbjct 3073205 TACCGAGCAGCGCGCAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCT 3073264
Query 794131 CGATGATGATCTGC 794144
|| ||||||| |||
Sbjct 3073265 CGGTGATGATGTGC 3073278
Score = 105 bits (116), Expect = 1e-16
Identities = 152/214 (71%), Gaps = 3/214 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| |||| ||| ||||| | ||||| || |||| ||||| |||||||||
Sbjct 3073728 GCCTCTGGTATTTGTACCTCGCCGCTAAAGCGCTCGACCAGATTCTCGTTGACGATGCCG 3073787
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| |||||||| |||||||||||||| || ||| ||||| ||||| |||||
Sbjct 3073788 TCGGATGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTCATCGTCATTGAGC 3073847
Query 796270 GA---GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
| ||||| | ||| | ||| |||| ||| ||||||||||| |||||
Sbjct 3073848 CTCTTGTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAGAAGGAA 3073907
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTT 796360
|| |||||||| |||||||| | ||| | | |||
Sbjct 3073908 GCTTCGGCCTTCTTGTACATTTGCCAGACCTGTT 3073941
Score = 89.7 bits (98), Expect = 8e-12
Identities = 114/155 (74%), Gaps = 3/155 (2%)
Strand=Plus/Plus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
|||||||||||||| ||||||||||||||||| ||||||| ||| || |||
Sbjct 3073384 AGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAG 3073443
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
|| || |||||||| ||||||||| | || || ||| || || ||| || | | |
Sbjct 3073444 AAAATACCCTCGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTG--GAGCTCTTGT 3073501
Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531
| | ||||| ||||| |||||||| ||||| ||
Sbjct 3073502 CAGAT-ATCCATTTCATTGCCCACTCGGCCTTCTT 3073535
>seq14
Length=1000850
Score = 118 bits (130), Expect = 2e-20
Identities = 95/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| | || |||||| | || |||||||| || ||||||
Sbjct 372311 GCTGCCAACTACCTCGACATCAAGGCACTACTCGATGTCGGATGCAAGACGGTCGCCAAC 372370
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| ||||| || ||||| ||||| || || ||| || |||
Sbjct 372371 ATGATCAAGGGCAAGTCCCCCGACGAGATCCGAAAGACGTTCAATATCCAGAACG 372425
>seq8
Length=2851179
Score = 114 bits (126), Expect = 2e-19
Identities = 363/551 (66%), Gaps = 15/551 (3%)
Strand=Plus/Minus
Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445
|| ||||| ||| | | || |||||||||||||| || ||| || || || ||||||
Sbjct 1284792 TCGATCTTTGAGTCCGGGTCACTGGCGCTCATCTTTCCTCCCT--GT-AGTCCAGGCACC 1284736
Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505
| ||||| | || || ||||| ||| || | | |||||| || |||
Sbjct 1284735 ATGGGGTTCATGAGATGTGCGCGCTCCTTGTATCCAATCTTAGGCAGGACTTCCTTCGCC 1284676
Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565
| ||||||||||| | |||||| ||||| ||||| | || || ||||||| ||||
Sbjct 1284675 AGCGCAAAGATCTTCCTCTGGTCCACGCCGCCGAACTGCACATCCACATCGAGGTACTGC 1284616
Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCAT 2411624
||||| || |||||||| || ||||||| || ||| | ||||| || | || |
Sbjct 1284615 TCGTCCAGCGCCTGCATAAGTGGGTAGATCAGCCCGCTCAACGGCGCATTCTCCGT-CTG 1284557
Query 2411625 CTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGCCGACGGTCACGCGCGCCGTCAGG 2411682
|||||| |||| ||| |||||| || ||| ||||| || ||||| | || ||
Sbjct 1284556 CTTGACGACCTCCGCGCCGGCCTTCTTCGCGTCGTGC--TCGCTCACGATGGATGTAAGT 1284499
Query 2411683 CGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCG 2411742
||||| || || | |||| | | ||| | | ||| ||| | || || ||
Sbjct 1284498 CGCAATAGATCCATGAAGTAGTCTGGTTTGAGCTCGAAGTCGGATCCGAGGACGAACTCT 1284439
Query 2411743 AGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGC-AAAC--TCGTAC 2411799
|| | || |||| | | || |||| || ||||| | |||| | ||||
Sbjct 1284438 AGCTTGTTGGTCGAGACGTTGACGGCGTGCAGCAGAGCGGTGATGACGAAACGGTAGTAC 1284379
Query 2411800 CAGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGC 2411859
|||| ||| || |||||| || |||| ||| |||||||||| | ||||
Sbjct 1284378 --TCGGC-GCGGAACTTGACGAGTTCAATGGGCGCTTTGAGATTGTCGAGGAAGCCGTGG 1284322
Query 2411860 ACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAG 2411919
| ||| || | ||||||| | || || || || || ||||| || | || | || | |
Sbjct 1284321 ATGTCCGCGAGGAGGATCTTGACGCGGCAACCTGCTTGGAGGAATTGTGCGATCTTGAGG 1284262
Query 2411920 ATGGGCACAAA 2411930
| |||||||||
Sbjct 1284261 ACGGGCACAAA 1284251
>seq21
Length=491942
Score = 107 bits (118), Expect = 3e-17
Identities = 273/412 (66%), Gaps = 15/412 (4%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|||||||||||||| || || | | ||||| ||| || | || ||||| || |
Sbjct 118805 GACGGCAACATGCCGCACGTCATCATCTCGGGCATGCCTGGAATTGGAAAGACGACCTCC 118864
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
|| ||||| ||||| | | |||||| || | | |||||||||||||| |||
Sbjct 118865 ATTCTCTGCCTCGCGCGGCAGATGCTGGGCGACGCATACAAGGAGGCCGTGCTCGAGCTC 118924
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC--ATCAAGCATCACGCTT 2019180
|| || || || |||||||| | || ||||| | ||||| |||||| ||||
Sbjct 118925 AACGCCTCCGATGAGCGCGGTATAGATGTCGTTAG--GAATCGAATCAAG-----GGCTT 118977
Query 2019181 CGAAAAGAA-----TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGC 2019235
| | |||| || || || || ||| | || ||| | |||| || ||||| ||
Sbjct 118978 TGCACAGAAGAAGGTCACACTACCACCGGGCAGACAGAAGCTTGTCATTCTGGATGAAGC 119037
Query 2019236 CGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAA 2019295
||| || | ||| | || || ||||| | ||| ||| ||||| | ||||
Sbjct 119038 GGACAGCATGACGAGCGGTGCGCAACAGGCGTTGCGAAGGACGATGGAGATTTACAGTGC 119097
Query 2019296 CACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAG 2019355
||||| || ||||| | || ||||| ||| | | ||||||| | || ||
Sbjct 119098 TACGACCCGATTTGCATTCGCATGCAATCAATCGAACAAGATCATCGAGCCTCTACAATC 119157
Query 2019356 CCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCG-CCGC 2019406
||||| || ||| | |||| ||| ||||| || ||||||||| ||| ||||
Sbjct 119158 GCGTTGTGCTATCCTCCGCTATGCCCGCCTTACAGACGCCCAGGTCGTCCGC 119209
>seq4
Length=3241893
Score = 96.9 bits (106), Expect = 5e-14
Identities = 179/260 (69%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|| || ||||| | || || | ||| |||| || ||||| || | || ||||| |||
Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
||| || || || | | |||||| || | || || | | ||| | | ||
Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCA 827602
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| ||||| || | |||||||| | |||||| | ||||| || || ||||||||||||
Sbjct 827603 ATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCG 827662
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCG-CGCCGTGCC 2073779
|| ||| ||||||| || | || ||||| || || |||| ||||| | || ||
Sbjct 827663 ATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTG-GGGCGATGGGGTCCC 827721
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
||||||||||| || ||||
Sbjct 827722 CGCATTGAAGAGGGTCGGCG 827741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916241081271950
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