Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 8e-21
seq8 111 1e-19
>seq3
Length=4703234
Score = 114 bits (126), Expect = 8e-21
Identities = 143/194 (74%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || ||||||||| ||||| ||||| |||||| |||| ||||
Sbjct 3808033 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCT 3807974
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||||||||||| || |||||||| |||| | |||||||||||
Sbjct 3807973 TCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 3807914
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| || ||| || || | ||| ||
Sbjct 3807913 TGGATCTTGGACTTCAC--AT--TGTCGATTGTGTCAGAGGACTCCACCTCGAGGGTGAT 3807858
Query 34942 GGTCTTTCCCGTGA 34955
|||||| || ||||
Sbjct 3807857 GGTCTTGCCGGTGA 3807844
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 10/218 (5%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| ||||| |||||| |||| ||||
Sbjct 3808261 AGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCC 3808202
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||| ||||| || || || | || | |||||||||||
Sbjct 3808201 TCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCC 3808142
Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || || ||| |||| |||| | || || || || | || |
Sbjct 3808141 TGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGAT-----TCCACCTCGAGCGTGA 3808087
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| ||||| || || | |||||| || ||||||||||||
Sbjct 3808086 TCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATG 3808049
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| |||||||||||||| || || || || | || | ||
Sbjct 3808945 AGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCT 3808886
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||| || || |||||||| | || | |||||||||||
Sbjct 3808885 TCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 3808826
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || ||| |||||| || | || ||||||
Sbjct 3808825 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTC 3808766
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || ||||| |||||
Sbjct 3808765 TTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/217 (69%), Gaps = 10/217 (5%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| ||||||||| ||||| ||||| | | || ||||
Sbjct 3808717 AGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGGCCATCC 3808658
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||||||||| || || || || || | || | |||||||||||
Sbjct 3808657 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGGATGCCCTCCTTGTCC 3808598
Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || |||||| ||| ||||| | || || || |||| || |
Sbjct 3808597 TGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGAT-----TCAACCTCAAGCGTAA 3808543
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || ||||| || || || |||||
Sbjct 3808542 TGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
>seq8
Length=2851179
Score = 111 bits (122), Expect = 1e-19
Identities = 120/158 (76%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
|||||| | || | ||||| ||||| | ||| ||||||||| ||||| ||||| ||
Sbjct 895293 TCCTCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 895234
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
||| |||| | || ||||| ||||||||||||||||||| || ||||||||| | ||
Sbjct 895233 AAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 895174
Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| ||||||||||| || |||||| ||||| ||
Sbjct 895173 AATGCCCTCCTTGTC--TTGAAGTTTGTTAGACGGTTG 895138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692601530950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |