Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 9e-16
seq4 96.9 3e-15
>seq3
Length=4703234
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | ||||||| || || |||||||||||||||| ||||| ||| ||
Sbjct 3808714 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTCAACGTACGGCCATCCTCA 3808655
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || |||| |||| |||||||||||||| || || ||||| || || ||
Sbjct 3808654 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGGATGCCCTCCTTGTCCTGG 3808595
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | || | |||||||| | || || || | ||| | || ||
Sbjct 3808594 ATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACCTCAAGCGTAATGGTCTTG 3808535
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || || || | |||||| |||||
Sbjct 3808534 CCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| |||| | | ||||| || || |||||||||||| | || || ||||||
Sbjct 3808486 ACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCG 3808427
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || || | |||| |||||||||||||| ||||| ||||| || || || |
Sbjct 3808426 AGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGA 3808367
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | || | ||||| | | || || |||| ||| | ||| ||
Sbjct 3808366 ATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACCTCGAGCGTAATCGTCTTG 3808307
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| |||| || || | ||| ||||||||
Sbjct 3808306 CCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| | ||| || ||| |||||||| || || |
Sbjct 3808243 GACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCG 3808184
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || ||||||||||| ||||| ||||| || || || || || ||||
Sbjct 3808183 AAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCACG 3808124
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | | ||||| |||| ||| | ||| || || |||| || ||
Sbjct 3808123 TTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTG 3808064
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 3808063 ACGAAGATCTGCATG 3808049
>seq4
Length=3241893
Score = 96.9 bits (106), Expect = 3e-15
Identities = 459/717 (64%), Gaps = 27/717 (4%)
Strand=Plus/Plus
Query 147705 CTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGA 147764
||| ||||| || || || || || || || ||||| | | ||| ||||| || |
Sbjct 827242 CTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGT 827301
Query 147765 CCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACA- 147823
|||| | ||| | | | ||||| ||| ||||| ||||| | ||||| |||||| |
Sbjct 827302 CCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAA 827361
Query 147824 TAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTTTCAAA--TTAAGCACG 147879
|||| || || || || | | || | ||||| | | || | | | ||| | |
Sbjct 827362 TAAG-TCACGAGC---GCGAACTTCTTCTTTGCCATGATTC-TTCCGGAGGTCAAGGAAG 827416
Query 147880 CTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT--- 147936
| | | |||||||||||| || || | ||||| ||| | ||||||| || ||
Sbjct 827417 CCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTG 827476
Query 147937 CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCG 147996
||||| || || |||| | | | ||||| | || || | ||| || || |||
Sbjct 827477 CCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCG 827536
Query 147997 CTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGG--GCTCGCACTTCGTGCACGT 148054
||| ||||| || || | || | | ||| ||| || || | ||| || |
Sbjct 827537 TTCGACGTGCCATTTGTTCCACCAATGTAG--GCCCCGGTAGCACGAATCCGGTGGACAT 827594
Query 148055 TAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTA 148112
| | ||||| ||||| || || || || ||||| || | || ||| ||
Sbjct 827595 TCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCA--CGTCTTCAGTGTGTCATA 827652
Query 148113 GATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAAT 148172
|||||| ||||||||||| | || | | | | || || || ||||||| ||
Sbjct 827653 GATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGA 827712
Query 148173 CCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCAT 148232
| || ||||| ||| ||||| || ||||| || || | || ||| |||
Sbjct 827713 TGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTT---GCTCGACAT 827769
Query 148233 GCGA---TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289
| | || |||||||| || | |||||||| ||||| || ||||| | | || ||
Sbjct 827770 GTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACG 827829
Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349
||| |||||||| ||||| || ||||||| || | ||| || ||| || |||
Sbjct 827830 CATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCG 827889
Query 148350 TTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
||| || || ||| |||| ||| ||| ||| | || || | ||||| |||| ||
Sbjct 827890 TTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGC 827946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610902118000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |