Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 159 5e-33
seq4 95.1 2e-13
seq21 86.0 9e-11
>seq1
Length=5232100
Score = 159 bits (176), Expect = 5e-33
Identities = 210/288 (73%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838
||| |||||||| || |||||||| || ||||| ||||||||||| ||| |||| |||
Sbjct 3073933 TGGCAAATGTAC-AAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAAGAGATCGATCTCTC 3073875
Query 1455839 CGCCGACACGGTCCACTGGGT---GTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895
| ||| | ||||| | ||| | ||||| |||||| ||||| ||
Sbjct 3073874 CAAAGACCTTCACGACTGGAACAAGAGGCTCAATGACGATGAGCGCTTCTTCATTTCACA 3073815
Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955
|||||||||||| || |||||| ||| |||||||| |||||| |||| || ||||
Sbjct 3073814 CGTCCTCGCCTTCTT-CGCCGCATCCGACGGCATCGTCAACGAGAATCTGGTCGAGCGCT 3073756
Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015
||| ||||| ||| | |||||||| || | || || || ||||||||| || |
Sbjct 3073755 TTAGCGGCGAGGTACAAATACCAGAGGCGCGATGCTTCTATGGCTTCCAGATCATGATGG 3073696
Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
| ||||||||||| || || |||||||| |||||||||| ||| |||
Sbjct 3073695 AGAACATCCACTCGGAGACGTACTCGCTGTTGATCGACACATACATCA 3073648
Score = 109 bits (120), Expect = 8e-18
Identities = 187/266 (70%), Gaps = 8/266 (3%)
Strand=Plus/Minus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
|||| |||||| |||||| ||| |||||||| ||||||| ||| |||| | |||||
Sbjct 3073279 AGCACATCATCACCGAGGCGGTCAAGATCGAGCAAGAGTTCCTCACCGAGGCACTGCCTT 3073220
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
||||| |||| |||||| | || |||||||| ||||| || || ||||||||
Sbjct 3073219 GCGCGCTGCTCGGTATGAACTCTGGT-CTGATGTGCCAATACATCGAGTTC-GTCGCCGA 3073162
Query 1456638 CCGCCTGCTCGCGGCGCTCGGC--TGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||||||||| | | |||||| | | ||| ||| | ||||||| |||
Sbjct 3073161 CCGCCTGCTATTGTCTCTCGGCAATCC---CAAGGTTTACAACGCCACCAACCCCTTCGA 3073105
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGA 1456754
| |||||| ||||| | | |||||||||||||| |||||| ||||| || ||
Sbjct 3073104 CTTCATGGAGAACATCTCCTTGGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGA 3073045
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780
||| ||| | ||||||| ||||
Sbjct 3073044 CTACCAGAAGTCTGGCGTCATGGCCA 3073019
Score = 87.8 bits (96), Expect = 3e-11
Identities = 119/158 (75%), Gaps = 11/158 (7%)
Strand=Plus/Minus
Query 1456123 aaaaaGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||| ||||| ||||| ||||| ||||| || ||| || ||| ||
Sbjct 3073535 AAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACAAG-AG---CTCCAC-CTTCGCGT 3073481
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CC 1456237
||| || || | ||||||||| |||||||| || || ||| || ||| ||| ||
Sbjct 3073480 CGCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGATCCTTC-GCGTCC 3073422
Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| ||||||||||||||||| ||||||||||| ||
Sbjct 3073421 ATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCT 3073384
>seq4
Length=3241893
Score = 95.1 bits (104), Expect = 2e-13
Identities = 180/260 (69%), Gaps = 4/260 (2%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCG- 259951
||||||| |||| || ||||| || |||| || ||||| ||||| || || ||
Sbjct 827770 CATGTCG-AGCAAGTACTTCACACACGCTTCGCCGACCCTCTTCAATGCGGGGACCCCAT 827712
Query 259952 CGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATC 260011
||||| || | || || ||||| || | || ||||||| || ||||||||||||
Sbjct 827711 CGCCC-CAAATGTCCTCCTGCTTCCTCATCGATATGAAGGAGGACAGCATCGAGGGCATC 827653
Query 260012 TATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCC 260071
|||||||| || ||| |||||| | |||||||| | || ||||| || ||| |
Sbjct 827652 TATGACACACTGAAGACGTGCGCCATGATCTCCAAAACCGCAGGCGGTATTGGTCTGAAT 827593
Query 260072 GCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGC 260131
| ||| | | || || | || |||||| | | || || || ||| ||| |||||
Sbjct 827592 GTCCACCGGATTCGTGCTACCGGGGCCTACATTGGTGGAACAAATGGCACGTCGAACGGT 827533
Query 260132 CTTGTGCCCATGCTTCGCGT 260151
|| | || |||||||| ||
Sbjct 827532 CTCATCCCTATGCTTCGTGT 827513
>seq21
Length=491942
Score = 86.0 bits (94), Expect = 9e-11
Identities = 266/409 (65%), Gaps = 2/409 (0%)
Strand=Plus/Minus
Query 332839 GCGACCGGCGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTG 332898
||| | | ||| |||||||| || ||||| || |||| ||||| |||||||| ||
Sbjct 119212 GCGGCGGACGACCTGGGCGTCTGTAAGGCGGGCATAGCGGAGGATAGCACAACGCGATTG 119153
Query 332899 CAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGT 332958
|| | |||||||| | | ||| ||||| || | ||||| || |||||| |
Sbjct 119152 TAGAGGCTCGATGATCTTGTTCGATTGATTGCATGCGAATGCAAATCGGGTCGTAGCACT 119093
Query 332959 ATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTC 333018
| | ||||| ||| || | |||||||| || | ||| | || ||| || ||
Sbjct 119092 GTAAATCTCCATCGTCCTTCGCAACGCCTGTTGCGCACCGCTCGTCATGCTGTCCGCTTC 119033
Query 333019 GTCGAGGATGATGATCTTGTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGT 333077
|| || |||| | ||| || | ||||| | || || ||| | ||| || |
Sbjct 119032 ATCCAGAATGACAAGCTTCTGTCTGCCCG-GTGGTAGTGTGACCTTCTTCTGTGCAAAGC 118974
Query 333078 GTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCA 333137
||||| || | ||||| || | |||||||| || || |||||||| |||||||
Sbjct 118973 CCTTGATTCGATTCCTAACGACATCTATACCGCGCTCATCGGAGGCGTTGAGCTCGAGCA 118914
Query 333138 CGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCT 333197
||||||| | | || | |||| | ||||| ||||| ||| || ||||
Sbjct 118913 CGGCCTCCTTGTATGCGTCGCCCAGCATCTGCCGCGCGAGGCAGAGAATGGAGGTCGTCT 118854
Query 333198 TGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTC 333246
| || | || ||| |||| | | || || ||||||||||||||
Sbjct 118853 TTCCAATTCCAGGCATGCCCGAGATGATGACGTGCGGCATGTTGCCGTC 118805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177806377408100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |