Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 2e-24
seq8 89.7 5e-13
>seq3
Length=4703234
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| |||||||||||||||| | ||||| |||| || |||||||| ||||| ||
Sbjct 3808924 TCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 3808865
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | |||||||||||||| || | || |||||||||| |||||| ||| | |||
Sbjct 3808864 ATGAGCCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGTT 3808806
Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | |||||||| || || ||||| | ||| || || || || |||| ||| || ||
Sbjct 3808805 GTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGAC 3808746
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 3808745 GAAGATTTGCAT 3808734
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || || |||||||| || || ||
Sbjct 3808241 CTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 3808182
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||| || |||| ||| | || |||||||||| |||||| ||||| ||
Sbjct 3808181 GATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCAC-GT 3808123
Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | || || ||||||||||| | ||||||||| || || ||||| || || |
Sbjct 3808122 TGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGA 3808063
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 3808062 CGAAGATCTGCAT 3808050
Score = 100 bits (110), Expect = 3e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || ||||||||||| || || ||
Sbjct 3808013 CTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 3807954
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||||| || | || |||||||||| |||||| ||||| | |
Sbjct 3807953 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATT 3807894
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||| || |||||||| | ||||| || || || ||
Sbjct 3807893 GTCGATTGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 3807846
>seq8
Length=2851179
Score = 89.7 bits (98), Expect = 5e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || |||| ||||||||||| || || ||
Sbjct 895257 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAA 895198
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||| ||||||||||| | |||| || |||||||||
Sbjct 895197 GATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 895159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793318254000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |