Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 158 2e-33 seq1 91.5 2e-13 >seq4 Length=3241893 Score = 158 bits (174), Expect = 2e-33 Identities = 580/906 (64%), Gaps = 2/906 (0%) Strand=Plus/Plus Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564 || |||||| ||||| ||||| || |||| || | | ||||||||||| || || Sbjct 827231 GTGTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGG 827290 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624 ||||| | || |||| | | | |||| || || ||||| || || || |||||||| Sbjct 827291 CACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCAC 827350 Query 69625 AGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCG 69684 | || ||| | || | | | | |||||| || || ||| || || || Sbjct 827351 AACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCA 827410 Query 69685 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGT 69744 || || | | || || | |||||||| || || || || || | | || || ||| Sbjct 827411 AGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGT 827470 Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804 || || || || ||||| | || || || || || || ||||| | ||||| || || Sbjct 827471 TTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATG 827530 Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864 | ||| || || | |||||||||||| ||| || || | || ||||| Sbjct 827531 AGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGG 827590 Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTC 69923 | | ||||| || || ||||| |||| ||||| | || | |||| |||| |||||| Sbjct 827591 ACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGC-ACGTCTTCAGTGTGTC 827649 Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983 ||| || ||||| ||||| || || |||| | | || || ||| |||||||| | Sbjct 827650 ATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGG 827709 Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAG 70043 | || |||||||| || | || || || ||||| ||||| | || || | Sbjct 827710 CGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACAT 827769 Query 70044 CAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACG 70103 ||||||||| ||||| || || || || ||| || || | | ||||| Sbjct 827770 GTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACG 827829 Query 70104 CATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTT 70163 ||||| ||| || || || || || | |||| | ||||| | |||||||| Sbjct 827830 CATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCG 827889 Query 70164 TTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223 ||| ||||| || || || || | | ||| ||||| | ||||| | ||| | || Sbjct 827890 TTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGA 827949 Query 70224 ATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGA 70283 || || | || | ||| | || || || || | ||| || ||||| Sbjct 827950 GTTGAGATCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATCATCGGCTG 828009 Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343 | || ||||| || || || ||||| ||| | | |||| | ||| | ||| | Sbjct 828010 GCTCTTGCCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTG 828069 Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 ||||| |||| ||||| | ||| || | || || | ||||| || || ||||| || Sbjct 828070 CTTTTTGGTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTC 828129 Query 70404 AGGATG 70409 ||||| Sbjct 828130 GGGATG 828135 >seq1 Length=5232100 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | ||||||||| | | || | ||| || || || || || Sbjct 3073326 GCAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAG 3073385 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| ||||| |||||||| || |||| || || |||||| ||||| Sbjct 3073386 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAA 3073445 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || ||||| || ||||| Sbjct 3073446 AATACCCTCGACAGCGGCAAAGGCTACAAG 3073475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908370682000