Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 2e-33
seq1 91.5 2e-13
>seq4
Length=3241893
Score = 158 bits (174), Expect = 2e-33
Identities = 580/906 (64%), Gaps = 2/906 (0%)
Strand=Plus/Plus
Query 69505 GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGA 69564
|| |||||| ||||| ||||| || |||| || | | ||||||||||| || ||
Sbjct 827231 GTGTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGG 827290
Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAA 69624
||||| | || |||| | | | |||| || || ||||| || || || ||||||||
Sbjct 827291 CACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCAC 827350
Query 69625 AGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCG 69684
| || ||| | || | | | | |||||| || || ||| || || ||
Sbjct 827351 AACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCA 827410
Query 69685 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGT 69744
|| || | | || || | |||||||| || || || || || | | || || |||
Sbjct 827411 AGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGT 827470
Query 69745 TTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATA 69804
|| || || || ||||| | || || || || || || ||||| | ||||| || ||
Sbjct 827471 TTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATG 827530
Query 69805 ATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTA 69864
| ||| || || | |||||||||||| ||| || || | || |||||
Sbjct 827531 AGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGG 827590
Query 69865 ATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTC 69923
| | ||||| || || ||||| |||| ||||| | || | |||| |||| ||||||
Sbjct 827591 ACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGC-ACGTCTTCAGTGTGTC 827649
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
||| || ||||| ||||| || || |||| | | || || ||| |||||||| |
Sbjct 827650 ATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGG 827709
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAG 70043
| || |||||||| || | || || || ||||| ||||| | || || |
Sbjct 827710 CGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACAT 827769
Query 70044 CAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACG 70103
||||||||| ||||| || || || || ||| || || | | |||||
Sbjct 827770 GTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACACACG 827829
Query 70104 CATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTT 70163
||||| ||| || || || || || | |||| | ||||| | ||||||||
Sbjct 827830 CATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCG 827889
Query 70164 TTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223
||| ||||| || || || || | | ||| ||||| | ||||| | ||| | ||
Sbjct 827890 TTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGA 827949
Query 70224 ATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGA 70283
|| || | || | ||| | || || || || | ||| || |||||
Sbjct 827950 GTTGAGATCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATCATCGGCTG 828009
Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343
| || ||||| || || || ||||| ||| | | |||| | ||| | ||| |
Sbjct 828010 GCTCTTGCCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTG 828069
Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403
||||| |||| ||||| | ||| || | || || | ||||| || || ||||| ||
Sbjct 828070 CTTTTTGGTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTC 828129
Query 70404 AGGATG 70409
|||||
Sbjct 828130 GGGATG 828135
>seq1
Length=5232100
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||||||||| || | ||||||||| | | || | ||| || || || || ||
Sbjct 3073326 GCAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAG 3073385
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| ||||| ||||| |||||||| || |||| || || |||||| |||||
Sbjct 3073386 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAA 3073445
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| || || || || ||||| || |||||
Sbjct 3073446 AATACCCTCGACAGCGGCAAAGGCTACAAG 3073475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908370682000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |