Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq7 84.2 2e-11 >seq3 Length=4703234 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | ||||| || | || || || || || || |||||||||||| Sbjct 3808732 CCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCTC 3808673 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || ||||| || |||||| | |||||||||||||||||||| || Sbjct 3808672 AACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGGG 3808613 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||| || | | |||||| Sbjct 3808612 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAACC 3808553 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || || ||||||||| Sbjct 3808552 TCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCATA 3808505 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || || ||||| ||||| ||| Sbjct 3808960 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAG 3808901 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||||||||| || || ||| | ||||| ||||| || ||||| || Sbjct 3808900 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3808841 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||||| ||| || || Sbjct 3808840 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 3808781 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||||||| || || |||||||||||| Sbjct 3808780 TCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCATA 3808733 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||||| |||| || || || || || || ||||||||| Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||||||||| || || ||| | |||||||||||||||||||| || Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||| || | | || | || || | | |||||| Sbjct 3808384 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAACC 3808325 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || ||||| |||||| Sbjct 3808324 TCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 3808277 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| | | |||| | || |||||||| || || Sbjct 3808246 GTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 3808187 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| |||||||||||||| || | ||||| || || |||||| ||| Sbjct 3808186 GCGAAGATGAGTCGCTGTTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTC 3808127 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | ||| || || || || || | ||||| |||| || Sbjct 3808126 ACGTTGTCGATGGTATCCGATGATTCCACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTC 3808067 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 3808066 TTGACGAAGATCTGCAT 3808050 >seq7 Length=3010262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| || | |||| ||| | ||| || || || || || ||||| |||| Sbjct 2377810 TGCCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGC 2377869 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || || ||| | |||||||||||||| || || | Sbjct 2377870 TGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGG 2377929 Query 27139 GCACACCCTCTTTATCGGCGATCTTG 27164 | | || ||||| || ||||||| Sbjct 2377930 GGATGCCTTCTTTGTCCTGGATCTTG 2377955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934141055600