Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 1e-14 seq1 91.5 5e-13 >seq4 Length=3241893 Score = 96.9 bits (106), Expect = 1e-14 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| | |||||| ||| | || || |||||||| ||| |||| Sbjct 827529 ATCCCTATGCTTCGTGTCTACAACAATACCGCTAGGTATGTTGATCAAGGCGGCAACAAA 827470 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATT 255085 |||||||| ||||| |||||||||||||||| |||||||||||| || Sbjct 827469 CGCCCAGGTGCGTTTGCCATCTACCTGGAGCCATGGCACGCCGACGTT 827422 >seq1 Length=5232100 Score = 91.5 bits (100), Expect = 5e-13 Identities = 118/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || || || ||||| | ||||| || | || || || || | | || || |||| Sbjct 3073479 GCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGG-ATCCTTCGCGTCCA 3073421 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || ||||| || || |||| ||| |||||||| || ||||| ||| Sbjct 3073420 TCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCGAATGAACTCATCT 3073361 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||| || ||||| |||| |||||||||||| || |||| Sbjct 3073360 CTCGTGATGAGGGCATGCACACCGACTTCGCCTGCCTCCTCT 3073319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334982472250