Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
seq4 105 8e-18
>seq1
Length=5232100
Score = 131 bits (144), Expect = 2e-25
Identities = 338/503 (67%), Gaps = 18/503 (4%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| |||||||| |||||||||||||| || | | | ||||| |||||
Sbjct 3073042 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATG 3073101
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGG-TGGCACCCCAACTTGTTTGAGGAG 122486
||||| || || || | ||||| ||| |||| | || || || ||
Sbjct 3073102 AAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAAT----AGCAG 3073157
Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546
|| || | || |||| ||||| | | ||||| ||||||||||||||| ||
Sbjct 3073158 GCGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGC 3073217
Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606
|| || ||||| || || |||| ||| ||| |||| |||||||| | | ||||
Sbjct 3073218 GCAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTG 3073277
Query 122607 GTGGA--TAGTT-TCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 122663
| || | || | | | | | || | || | | | || ||| || ||| ||
Sbjct 3073278 CTCGACCTCCTTCTTGCTTGGGCGTGTGTTGAGAAGGGAGAAGAGGAGG--CA-GGCGAA 3073334
Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723
|| ||| | |||||||| || || || |||||||| |||||| || || |||||
Sbjct 3073335 GTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCAT 3073394
Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCT 122782
|||||| |||||||| | ||| | || | ||| ||| || || |||||| |||||||
Sbjct 3073395 GAGACCGCGCTTCTTGAGCCAGAAGATGGACGC-GAAGGATCCACTGAAGAAAATACCCT 3073453
Query 122783 CCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCAT 122841
| ||| ||||| || | ||| || ||||||| | ||| ||| || | ||||
Sbjct 3073454 CGACAGCGGCAAAGGCTACAAGACGCGACGCGAAGGTG-GAGCTCTTGTCAGATATCCAT 3073512
Query 122842 TTCATTGCCCATTTCGCCTTCTT 122864
||||||||||| | ||||||||
Sbjct 3073513 TTCATTGCCCACTCGGCCTTCTT 3073535
>seq4
Length=3241893
Score = 105 bits (116), Expect = 8e-18
Identities = 348/536 (65%), Gaps = 9/536 (2%)
Strand=Plus/Plus
Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACAC 111613
|||| || ||||||||||| ||||| |||||||||| | |||| | || | |
Sbjct 827315 TCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAATAAGTCACGAGCG 827374
Query 111614 CGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGC 111673
||| | ||||| | || || || || | |||||||| | | | || ||||||
Sbjct 827375 CGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAAACGTCGGCGTGC 827434
Query 111674 CATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATA 111729
|||||||| || |||| || | | || | || | ||| |||||| |||||
Sbjct 827435 CATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGC-CTTGATCAACATA 827493
Query 111730 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 111789
| || || ||| | || |||||||| || || | ||| | || ||||||||
Sbjct 827494 CCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGACGTGCCATTTGT 827553
Query 111790 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 111849
|| | ||| | | || | | |||| | || |||||||| || ||
Sbjct 827554 TCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCAATACCGCCTGC 827613
Query 111850 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 111909
|| ||||| || ||| | | || || ||||||| || | ||| ||||||
Sbjct 827614 GGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTCATAGATGCCCTCGATGCTGTCCTC 827673
Query 111910 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 111969
||| | |||| |||||||| |||||| || || ||| || || |||||||||||
Sbjct 827674 CTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGATGGGGTCCCCGCATTGAAGAG 827733
Query 111970 GGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACA 112027
||| || | ||||| |||| || |||| ||||| | | ||||||||| | |
Sbjct 827734 GGTCGGCGAAGCGTGTGTGAA-GTA-CTTGCTCGACATGTAATTGTATGTCTCAATTGCC 827791
Query 112028 GAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||| |||||||| || || ||||||| | || ||||| | ||||| |||||
Sbjct 827792 TTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGCATGTGTTGTGG 827847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031607480000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |