Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 5e-21
seq1 116 5e-21
>seq4
Length=3241893
Score = 116 bits (128), Expect = 5e-21
Identities = 370/565 (65%), Gaps = 13/565 (2%)
Strand=Plus/Plus
Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060
||||| | ||| | ||| | || ||||| || ||||||||||| ||||| || |||
Sbjct 827288 GGGCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATC 827347
Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 119120
|| | ||| | || | || ||| |||| ||||||| | || ||||| || |
Sbjct 827348 CACAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGG 827407
Query 119121 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC---- 119176
|| | ||| | | | || |||||||| || |||||||| | || | | ||
Sbjct 827408 TCAAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGG 827467
Query 119177 CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236
| | | | || | || | |||||||| || || ||| | ||||||||||| ||
Sbjct 827468 CGTTTGTTG-CCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGG 827526
Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296
|||| ||| | || ||||||||| || | ||| | | | || | || |||
Sbjct 827527 GATGAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCAC-GA-ATC 827584
Query 119297 --GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354
||||| | || ||||||||| ||||| || ||||| |||||| | | ||
Sbjct 827585 CGGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGT 827644
Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414
|| | ||||| || ||||| ||| |||| | |||||||||||||| ||||||
Sbjct 827645 GTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATT 827704
Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG- 119473
|| ||| || || || || |||||||| || || | ||||| |||| || ||||
Sbjct 827705 TGGGGCGATGGGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAA-GTA-CTTGC 827762
Query 119474 -GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCG 119532
||||| | | ||| ||||| | | |||||||| || || || |||| |
Sbjct 827763 TCGACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGG 827822
Query 119533 AGACCCGCATAAACATGTATTGGGG 119557
| || ||||| | ||||| ||| ||
Sbjct 827823 ACACACGCATCAGCATGTGTTGTGG 827847
Score = 111 bits (122), Expect = 2e-19
Identities = 322/495 (65%), Gaps = 8/495 (2%)
Strand=Plus/Plus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
||| | | ||| ||||||||||| ||||||||||| || ||||||| || | |||
Sbjct 826066 GCCATCGTTCGAAGGTAGTACATGCCCGTCTTGAGACCGAGCTTCCACCCAGCAAAGTGC 826125
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947
|| |||| | |||| | ||| || | |||| || || | | || || ||
Sbjct 826126 ATAGAGGTGATCTTGCCCATGGTAGGTTCCTTCATGTGGATATTGAGAGACTGAGACTGG 826185
Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCAC 118007
||||||||| || ||||| || ||||| | | | || || ||||||||||
Sbjct 826186 TCGATGAAGGCGCCACGATCTGCAGCCATCTGCAGGATATGTCTCTGTGAGATTTCCCAC 826245
Query 118008 ACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCA 118067
|||||| ||||||| || |||||||| ||||| | ||| || || || |||
Sbjct 826246 ACAGTCTTGTAGAGTGCTTTGATATCATCGGGGATGTTGGGGATCCGCTGAATAGAGCCA 826305
Query 118068 CCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCC 118127
|| | || || || |||||| | | ||||| | || || | |||||
Sbjct 826306 CCTTCGGCGATGATCCTATTCTTCATGTTGTCGGACCACAAGCCCATGTCGACAAGATCT 826365
Query 118128 T----CCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 118183
| | || || |||||| | ||||| || ||||| || | ||
Sbjct 826366 TTGAGCAACCAGGG----ATTGACGATCTGGAACTCGCCAGCGAGAACACGGCGGGAGTA 826421
Query 118184 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGC 118243
||| |||| || || ||||||||||| || |||||||| | || || | ||| |||||
Sbjct 826422 GATGTTGGAGGTATAAGGCTCAAAGCATTCGTTGTTACCGAGAATCTGAGATGTAGAGGC 826481
Query 118244 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 118303
|| ||||| || |||| ||||||| ||| ||||| || | || ||| | ||
Sbjct 826482 AGTCGGCATAGGAGCCACGAGAAGGGAGTTGCGGAGGCCATGTTGGGCAATCTCAGCTTT 826541
Query 118304 GAGAGCGTCCCAGTC 118318
|||||| ||||||||
Sbjct 826542 GAGAGCATCCCAGTC 826556
>seq1
Length=5232100
Score = 116 bits (128), Expect = 5e-21
Identities = 328/498 (66%), Gaps = 8/498 (2%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||||||||||||||| ||||| ||| ||||| ||| ||||||||
Sbjct 3073042 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATG 3073101
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | ||| ||| ||| | | || | || || ||
Sbjct 3073102 AAGTCGAAGGGGTTGGTGGCGTTGTAAACCT-TGGGATTGCCGAGAGACAATAGCAGGCG 3073160
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||| ||||| | ||||| | ||||||||||||| || ||
Sbjct 3073161 GTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGCGCA 3073220
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || || |||| | | ||| || | || || || | |||| |
Sbjct 3073221 AGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTGCTC 3073280
Query 129967 AATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
| || | ||| || | | ||| | | | || ||| || ||| || ||
Sbjct 3073281 GACCTCCTTCTTGCTTGGGCGTGTGTTGAGAAGGGAGAAGAGGAGG--CA-GGCGAAGTC 3073337
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| | ||||| ||||| ||||||||||||||||||||| ||| || ||||||||
Sbjct 3073338 GGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCATGAG 3073397
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | |||||| || | || || ||| |||||| || ||||| ||
Sbjct 3073398 ACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACCCTCGAC 3073457
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCAT 130203
| || || || | |||||| || |||| | | ||| | | ||| |||||
Sbjct 3073458 AGCGGCAAAGGCTACAAGACGCGACGCGAAGGTGGAGCTCTTGTCAGATATCCATTTCAT 3073517
Query 130204 CGCCCACTGCGCCTTTTT 130221
||||||| ||||| ||
Sbjct 3073518 TGCCCACTCGGCCTTCTT 3073535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434813478000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |