Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 150 2e-31 seq1 105 8e-18 >seq4 Length=3241893 Score = 150 bits (166), Expect = 2e-31 Identities = 1123/1806 (62%), Gaps = 100/1806 (6%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| ||||| | ||||| ||| || |||| || ||||| |||||||| ||| | Sbjct 827847 CCACAACACATGCTGATGCGTGTGTCCGTCGGCATACATGGCGAAGACATCGATAAGGCA 827788 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||||||| | | ||||| |||| || |||| ||||| | || ||||||| Sbjct 827787 ATTGAGACATACAATTACATGTCGAGCAAG-TAC-TTCACACACGCTTCGCCGACCCTCT 827730 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||| || || ||| |||||||||||| |||||||| |||| | ||||||| Sbjct 827729 TCAATGCGGGGACCCCATCGCCCCAAATGTCCTCCTGCTTCCTCATCGATATGAAGGAGG 827670 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || ||| | || ||||||| || || | | ||| || ||||| || || | Sbjct 827669 ACAGCATCGAGGGCATCTATGACACACTGAAGACGTGCGCCATGATCTCCAAAACCGCAG 827610 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| || | |||| | | || | | ||| | || |||| Sbjct 827609 GCGGTATTGGTCTGAATGTCCACCGGATTCGTGCTACCGGGGCCTACATTGGTGGAACAA 827550 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 |||| || | ||| | || || |||||||| || | ||| || || | |||| Sbjct 827549 ATGGCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAATACCGCTAGGTATG 827490 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | |||||| ||| | || | || | | || |||| || |||||||||||| Sbjct 827489 TTGATCAAG-GCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTGGAGCCATGGCAC 827431 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGGT 104693 || || | | | |||||||| | || || || || | || || | |||| | Sbjct 827430 GCCGACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAAGAAGTTCGCGCT 827371 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 || || | || | ||| | |||||||| || || ||||||||| | || |||||| Sbjct 827370 --CGTGACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGCGTGCAGGAGA 827313 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | ||| | || || || | |||||||| | || | |||| Sbjct 827312 ACGGCGAGTGGACACTCATGTGCCCGAACGAATGTCCTGGTCTAGCGGACGTTTATGGTG 827253 Query 104814 AGGAGTTTG------------------------------------AAGCCCTTTACA-CA 104836 | ||||| | ||| ||| |||| || Sbjct 827252 ATGAGTTCGAGGAGCTATACACTTCGTGGGCTATTCCATCCCACTAAGGCCTGTACATCA 827193 Query 104837 A-----------AG-TACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGAT 104884 | || || ||| | ||||||| | | ||| || | ||| | || Sbjct 827192 ACTAACATTCGCAGATATGAGAAGCAAGGTCGTGGTCGCGAGACAGTCCGGGCT-CAGAA 827134 Query 104885 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAA 104943 | | ||| | || || ||| || |||||||||||||||| | ||||||||||| ||||| Sbjct 827133 GCTTTGGTATGCCATCCTCGAGGCTCAAACCGAGACTGGAAACCCATACATGCTGTACAA 827074 Query 104944 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCT 105003 ||| || || || | ||||| || || |||||| |||| |||| || ||||| || Sbjct 827073 AGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTGGGAACGATCCGCAGCTCCAACCT 827014 Query 105004 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 105063 || ||||| ||| | | | || || ||| || ||||| || |||||||| Sbjct 827013 TTGCACAGAGATCATCCAGTACACCTCTCCTGAGGAGGTCGCAGTGTGCAATCTCGCATC 826954 Query 105064 AATCGCTCTCCCCAAGTATGTGGA---TCCAGAGACAAAGACATTTGATTATGAAAAACT 105120 | ||||| |||| ||||||||| ||| | | || | || | | ||||| Sbjct 826953 TTTAGCTCTGCCCATGTATGTGGACATTCCTCATGCCGAG---TACGACTTCCAGAAACT 826897 Query 105121 CCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 105180 || || ||| | || ||||| || || |||| | |||||| ||| ||| Sbjct 826896 GCATGAGGTTGTTCAGACCGTCACTGTCAATCTCAACAAGATCATTGATGTCAATCATTA 826837 Query 105181 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCA 105240 ||| ||| | || || || || | | |||| | || ||||| ||||| ||||| Sbjct 826836 CCCGGTTCCGGAAGCCCGCAACAGCAACTTCAAACACAGGCCCATTGGCCTCGGCGTTCA 826777 Query 105241 GGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGG 105299 ||||| || || || ||| || || || ||| || || || || | | Sbjct 826776 AGGTCTTGCCGACGTCTTC-CTCGCCCTCCGATTGCCTTTCGAGTCTCCTGAGGCTAGGA 826718 Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359 | | || | || ||||| ||||| || || || || || || | || Sbjct 826717 AGCTTAACATCCAAATCTTTGAAACCATATACCATGCTGCCCTCACCGCATCATGCAAGC 826658 Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419 | || | | ||| || |||||| ||| ||| || || || || || ||||| | | Sbjct 826657 TTGCCAAAGAACTTGGACCCTATGAATCCTATGAAGGCTCCCCTGCCTCGCAAGGCATTC 826598 Query 105420 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGAAGCTCTCAA 105477 |||||| ||| |||| |||| || | || | || || | |||||||| |||||||| Sbjct 826597 TTCAATATGACATGT-GGAATGTCACCCCCA-CTGATCTTTGGGACTGGGATGCTCTCAA 826540 Query 105478 GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGC 105537 | || | | || || || ||| || ||| ||||||| ||||| || || Sbjct 826539 AGCTGAGATTGCCCAACATGGCCTCCGCAACTCCCTTCTCGTGGCTCCTATGCCGACTGC 826480 Query 105538 CTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 ||| || | || || | ||||| || ||||||||||| || || || | |||||||| Sbjct 826479 CTCTACATCTCAGATTCTCGGTAACAACGAATGCTTTGAGCCTTATACCTCCAACATCTA 826420 Query 105598 TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCT 105657 | | ||||| || ||||| ||| |||| ||| | ||| || || Sbjct 826419 CTCCCGCCGTGTTCTCGCTGGCGAGTTCCAGATCGTCA------ATC-CCTGGTTG--CT 826369 Query 105658 CAAA---------GAGATTGGTCTCTGGTCCAAGGATATGAAGGAT---CTCATGGTGAA 105705 |||| || || || | |||||| | | |||||| || |||| | | Sbjct 826368 CAAAGATCTTGTCGACATGGGCTTGTGGTCCGACAACATGAAGAATAGGATCATCGCCGA 826309 Query 105706 AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCG 105765 | ||||| || ||||| || | || || |||| || || | ||| Sbjct 826308 A---GGTGGCTCTATTCAGCGGATCCCCAACATCCCCGATGATATCAAAGCACTCTACAA 826252 Query 105766 CACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 105825 || || ||||||||| || || || | | ||||| ||||||||||| ||| Sbjct 826251 GACTGTGTGGGAAATCTCACAGAGACATATCCTGCAGATGGCTGCAGATCGTGGCGCCTT 826192 Query 105826 CATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTC 105885 ||| || || ||| | | ||| || |||| | || || ||| |||| || | Sbjct 826191 CATCGACCAGTCTCAGTCTCTCAATATCCACATGAAGGAACCTACCATGGGCAAGATCAC 826132 Query 105886 TTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATC 105945 ||||||||| | | |||||| |||||||| ||||| ||||| ||||| ||| | Sbjct 826131 CTCTATGCACTTTGCTGGGTGGAAGCTCGGTCTCAAGACGGGCATGTACTACCTTCGAAC 826072 Query 105946 TAAGGC 105951 | ||| Sbjct 826071 GATGGC 826066 >seq1 Length=5232100 Score = 105 bits (116), Expect = 8e-18 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || || | ||||| || || ||||| ||||| ||| | | |||| | | Sbjct 3073551 AGTTCCCTGCATCCGCAAGAAGGCCGAGTGGGCAATGAAATGGATATCTGACAAGAGCTC 3073492 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 |||| || ||| || | || ||||| ||| |||||||| |||||| ||| | Sbjct 3073491 CA-CCTTCGCGTCGCGTCTTGTAGCCTTTGCCGCTGTCGAGGGTATTTTCTTCAGTGGAT 3073433 Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 ||||| ||| | || | |||||||||||||| ||||||||||| || || |||||| Sbjct 3073432 CCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTGACCTTCTCG 3073374 Query 94912 AACGAGCTTATCTCTCGTGACGAGGG 94937 || || || ||||||||||| ||||| Sbjct 3073373 AATGAACTCATCTCTCGTGATGAGGG 3073348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260435462000