Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 5e-31
seq2 93.3 1e-13
>seq3
Length=4703234
Score = 150 bits (166), Expect = 5e-31
Identities = 253/366 (69%), Gaps = 0/366 (0%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| ||||| || | |||||||| | || |||||||| | || || || || |
Sbjct 447703 CCCGAGGAAATCTCCGCCATGGTTTTGGGCAAGATGAAGGAGGTCGCCGAGGCCTACCTT 447644
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| || || || | | || ||| |||| || || ||||| || || || || |||||
Sbjct 447643 GGAGAGACCGTCAAGAACGCAGTTGTTACCGTCCCCGCCTACTTCAACGACGCTCAGCGC 447584
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
| || || || || || || | |||||| || | |||||||| | || | || |||
Sbjct 447583 GCCGCTACCAAGGACGCCGGAACCATTGCCGGTCTTAATGTTCTCCGCGTGGTCAACGAA 447524
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
||||| ||||| || | || || || ||||| || | ||||| ||| | |||
Sbjct 447523 CCCACCGCTGCCGCTCTGGCCTACGGTCTTGACAAGACAGGTGACGCCGAACGCCAGATT 447464
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
| | | ||| | || ||||| ||||| ||||| || | || || || |||| ||
Sbjct 447463 ATCGTCTACGATCTCGGAGGTGGAACTTTCGATGTGTCGATCCTCACTCTCGAAGGCGGT 447404
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891
|||| |||||| | || || |||||||| || ||||||||||| || ||||| ||| |
Sbjct 447403 GTTTTCGAAGTTCAGGCTACCGCTGGTGACACTCATCTTGGTGGTGAGGATTTCGATCAG 447344
Query 349892 CGTCTC 349897
||| ||
Sbjct 447343 CGTGTC 447338
Score = 123 bits (136), Expect = 8e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || |||||||| || || || || || ||
Sbjct 3808280 CATACCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTC 3808221
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||| || || ||||| || || || || ||||| ||||| || || || ||||| ||
Sbjct 3808220 GGATAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGG 3808161
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || ||||| || || | || || || || || | ||| |||| |||
Sbjct 3808160 AGGGATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTC 3808101
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||| ||||| | || || || || ||||||||
Sbjct 3808100 CACCTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050
>seq2
Length=5130782
Score = 93.3 bits (102), Expect = 1e-13
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 140584 CTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTAT 140643
|||| || |||||||| ||| || || |||||||| || || || |||||||||||||
Sbjct 4781565 CTTCTAGCTGTTTTCCGAGAAATATGAGGCGTTGCTGGTCTGGGGGTATTCCTTCTTTAT 4781506
Query 140644 CCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTG 140703
|||| |||||| ||| | |||||| | | ||||| | || ||| | | |||||
Sbjct 4781505 CCTGGATTTTACTTTTGATATTATCGGTGGTGTCAGAGGACTCGCATTCGATTTCAACTG 4781446
Query 140704 TCTTTCCGGTTAGTGTTTT 140722
| || ||||| ||||||||
Sbjct 4781445 TTTTACCGGTGAGTGTTTT 4781427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253429290150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |