Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 208 8e-49
>seq4
Length=3241893
Score = 208 bits (230), Expect = 8e-49
Identities = 419/614 (68%), Gaps = 28/614 (5%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCC----GCGAGTCCGCGAGACATA 19173
||||| || | |||||||| |||||||| ||| || || | | ||||||||
Sbjct 827832 ATGCGTGTGTCCGTCGGCATACATGGCGAAGACATCGATAAGGCAATT----GAGACATA 827777
Query 19174 CGA---CCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGG 19230
| | | || |||| |||| |||||| ||||| |||||||||| ||||| || ||
Sbjct 827776 CAATTACATGTCGAGC---AAGTACTTCACACACGCTTCGCCGACCCTCTTCAATGCGGG 827720
Query 19231 TACGAACAAC-CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTG 19289
|| || | || || ||||| ||| ||||| | | ||||||||| |||||||| |
Sbjct 827719 GACCC-CATCGCCCCAAATGTCCTCCTGCTTCCTCATCGATATGAAGGAGGACAGCATCG 827661
Query 19290 AGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCG 19349
|||||||||| || || || ||| |||||| |||||||| | || ||||| |
Sbjct 827660 AGGGCATCTATGACACACTGAAGACGTGCGCCATGATCTCCAAAACCGCAGGCGGTATTG 827601
Query 19350 GGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAA------TGGGACGAACG 19403
| | | || || | |||| ||| ||| | | | ||| || || |
Sbjct 827600 GTCTGAA-TG-TCCA----CCGGATTCGTGCTACCGGGGCCTACATTGGTGGAACAAATG 827547
Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463
| | ||||| || |||| ||||| || |||| |||||| || || ||||| ||
Sbjct 827546 GCACGTCGAACGGTCTCATCCCTATGCTTCGTGTCTACAACAATACCGCTAGGTATGTTG 827487
Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523
| || || ||| ||||||| || |||| ||||||||||| |||||||||||||| |
Sbjct 827486 ATCAAGGCGGCAACAAACGCCCAGGTGCGTTTGCCATCTACCTGGAGCCATGGCACGCCG 827427
Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583
|||| | | ||||| || || || ||| || || | || || | ||| ||| |
Sbjct 827426 ACGTTTTCGGCTTCCTTGACCTCCGGAAGAATCATGGCAAAGAAGAAGTTCGCGCTCGTG 827367
Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643
|| | || || ||||||||||||||||| |||||| || || || || ||| |
Sbjct 827366 ACTTATTTTACGCGTTGTGGATTCCGGACCTGTTCATGAAGCGCGTGCAGGAGAACGGCG 827307
Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703
| ||| || ||||||||| ||||||| ||||| ||| | ||||| || || || | ||
Sbjct 827306 AGTGGACACTCATGTGCCCGAACGAATGTCCTGGTCTAGCGGACGTTTATGGTGATGAGT 827247
Query 19704 TCAATGAGTTGTAC 19717
|| | ||| | |||
Sbjct 827246 TCGAGGAGCTATAC 827233
Score = 174 bits (192), Expect = 2e-38
Identities = 409/607 (67%), Gaps = 14/607 (2%)
Strand=Plus/Plus
Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346
||| | ||| | ||| | || ||||| || || | || || || || |||| ||||||
Sbjct 827233 GTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCA 827292
Query 79347 CATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAG 79406
||| || ||| || ||| || || || || |||||| |||||||| |||||||
Sbjct 827293 CATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAA 827352
Query 79407 GGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAG 79466
|| || | ||| || || | || || | ||| || ||| || || || ||
Sbjct 827353 CGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAG 827412
Query 79467 AAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTT 79526
||| | | | |||||||||||| |||||||| |||||||| |||| ||| ||| ||
Sbjct 827413 GAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTT 827472
Query 79527 GCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGAT 79586
| |||||| || | || |||| || || |||||| | || || ||||| || | ||
Sbjct 827473 GTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAG 827532
Query 79587 GCCG-TCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGA 79643
||| ||| || ||| || || || || | ||| | || ||||| | | ||
Sbjct 827533 ACCGTTCGACG-TGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGA 827591
Query 79644 GCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTC 79703
|| | | || || || || | |||||||| |||||| ||| || || ||
Sbjct 827592 -CA-TTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGCACGTCTTCAGTGTGTC 827649
Query 79704 GTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG 79763
|||||||||||||| ||| ||||||||| ||| ||||||||| ||||| || ||
Sbjct 827650 ATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGG 827709
Query 79764 -GTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCT-- 79820
| || || || || |||||||||||||||| ||||| |||||| |||| |||
Sbjct 827710 CGATG-GGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTT---GCTCG 827765
Query 79821 -CATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGA 79879
||| || ||| ||||| | | || ||| ||||| || |||||||| | |
Sbjct 827766 ACATGTAATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACGGACA 827825
Query 79880 CGCGCAT 79886
| |||||
Sbjct 827826 CACGCAT 827832
Score = 158 bits (174), Expect = 1e-33
Identities = 487/743 (66%), Gaps = 33/743 (4%)
Strand=Plus/Minus
Query 20093 CACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTC 20152
||| |||| || | ||||||| || || || |||||||| ||| | ||| | |
Sbjct 826802 CACAGGCCCATTGGCCTCGGCGTTCAAGGTCTTGCCGACGTCTTCCTCGCCCTCCGATTG 826743
Query 20153 TCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCAC 20212
| ||||| ||| |||| | |||| |||| ||||| || || | |||||
Sbjct 826742 CCTTTCGAGTCTCCTGAGGCTAGGAAGCTTAACATCCAAATCTTTGAAACCATATACCAT 826683
Query 20213 GCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAG 20272
|| |||||| | ||| ||| | || |||||||| || || || || | | |
Sbjct 826682 GCTGCCCTCACCGCATCATGCAAGCTTGCCAAAGAACTTGGACCCTATGAATCCTATGAA 826623
Query 20273 GGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAG 20332
|| || || || || | || || || || ||||||||| ||||| | |||
Sbjct 826622 GGCTCCCCTGCCTCGCAAGGCATTCTTCAATATGACATGTGGAATGTCACCCCCACTGAT 826563
Query 20333 TTTTGGAGC------GCCCTCAAGGTTGAGATCAAGACCCAC--GGGCTTCGCAACTCGT 20384
||||| | || ||||| | |||||| | || || || || ||||||||
Sbjct 826562 CTTTGGGACTGGGATGCTCTCAAAGCTGAGATT--GCCCAACATGGCCTCCGCAACTCCC 826505
Query 20385 TGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG-GCT 20443
| ||||| || || |||||||| ||||| || | ||||| | || |||||||| |||
Sbjct 826504 TTCTCGTGGCTCCTATGCCGACTGCCTCTACATCTCAGATTCTCGGTAACAACGAATGCT 826445
Query 20444 TTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATG 20503
|| ||||| || || |||||||||||| || ||| || || || |||||| ||
Sbjct 826444 TT-GAGCCTTATACCTCCAACATCTACTCCCGCCGTGTTCTCGCTGGCGAGTTCCAGATC 826386
Query 20504 GTAAACAAGCACCTGGTC-CGCGA----CTTGCAGAAGATCGATATGTGGTCGCCCAAAA 20558
|| ||| | |||||| | | | |||| || || | ||||||| ||| |
Sbjct 826385 GT---CAATC-CCTGGTTGCTCAAAGATCTTGTCGAC-ATGGGCTTGTGGTCCGACAACA 826331
Query 20559 TTAAGAATGAAATTGTCCGAGCCGGCGGGAGCGTCCAGGCATTGGAT-------ATCCCC 20611
| |||||| || || |||| || || || | || |||| ||||||
Sbjct 826330 TGAAGAATAGGATCATC---GCCGAAGGTGGC-TCTATTCAGCGGATCCCCAACATCCCC 826275
Query 20612 CAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGAC 20671
| | |||| | | |||| ||| || ||||||||| |||||| ||| | |
Sbjct 826274 GATGATATCAAAGCACTCTACAAGACTGTGTGGGAAATCTCACAGAGACATATCCTGCAG 826215
Query 20672 ATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAG 20731
||||| || ||||| ||||||| |||||||||||| ||||| |||||| || |||| ||
Sbjct 826214 ATGGCTGCAGATCGTGGCGCCTTCATCGACCAGTCTCAGTCTCTCAATATCCACATGAAG 826155
Query 20732 AATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAG 20791
| || | | ||| ||| | | ||| ||||| | || ||| | || ||||||
Sbjct 826154 GAACCTACCATGGGCAAGATCACCTCTATGCACTTTGCTGGGTGGAAGCTCGGTCTCAAG 826095
Query 20792 ACGGGCATGTACTATCTGCGGAC 20814
|||||||||||||| || || ||
Sbjct 826094 ACGGGCATGTACTACCTTCGAAC 826072
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
||||| | ||||||||||||||||||||||| |||||| || | |||||||
Sbjct 826072 GTTCGAAGGTAGTACATGCCCGTCTTGAGACCGAGCTTCCACCCAGCAAAGTGCATAGAG 826131
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| | |||| ||| | || | || |||| ||| ||||| ||||| ||||||||||||
Sbjct 826132 GTGATCTTGCCCATGGTAGGTTCCTTCATGTGGATATTGAGAGACTGAGACTGGTCGATG 826191
Query 78310 TACGCACCGCGGTCGGCCGCCAT 78332
| || || || || || |||||
Sbjct 826192 AAGGCGCCACGATCTGCAGCCAT 826214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524457172000
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