Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 181 1e-40
seq1 105 7e-18
seq3 93.3 5e-14
>seq4
Length=3241893
Score = 181 bits (200), Expect = 1e-40
Identities = 357/519 (69%), Gaps = 8/519 (2%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA-ATCACCCTCAGAT 53325
|||||||| || ||||| |||| ||||| ||||| || || || ||| ||| || ||
Sbjct 827760 AAGTACTTCACACACGCTTCGCCGACCCTCTTCAATGCGGGGACCCCATCGCCC-CAAAT 827702
Query 53326 GTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCT 53385
||| ||||||||| | | |||||||| ||| ||||| |||||||| || || ||
Sbjct 827701 GTCCTCCTGCTTCCTCATCGATATGAAGGAGGACAGCATCGAGGGCATCTATGACACACT 827642
Query 53386 CAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG- 53444
||| ||| ||| |||||||| | || ||||| ||| | | || || | ||
Sbjct 827641 GAAGACGTGCGCCATGATCTCCAAAACCGCAGGCGGTATTGGTCTGAA-TG-TCCACCGG 827584
Query 53445 -TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT-GGAATCGTGCC 53502
| ||||| | ||| | || || || || ||| || ||| || || | ||
Sbjct 827583 ATTCGTGCTACCGGGGCCTACATTGGTGGAACAAATGGCA-CGTCGAACGGTCTCATCCC 827525
Query 53503 TATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAA 53562
|||||| || |||| |||||| || || |||| || | || || || || |||
Sbjct 827524 TATGCTTCGTGTCTACAACAATACCGCTAGGTATGTTGATCAAGGCGGCAACAAACGCCC 827465
Query 53563 GGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCT 53622
|| |||| ||||||||||| ||||| |||||||||||| || | | || || || ||
Sbjct 827464 AGGTGCGTTTGCCATCTACCTGGAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGACCT 827405
Query 53623 GCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGAT 53682
|| |||||| || | ||||| | ||| |||||| | ||| || |||||||
Sbjct 827404 CCGGAAGAATCATGGCAAAGAAGAAGTTCGCGCTCGTGACTTATTTTACGCGTTGTGGAT 827345
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAA 53742
||||||||| |||||| | ||| || || ||| |||||| || |||||||||||
Sbjct 827344 TCCGGACCTGTTCATGAAGCGCGTGCAGGAGAACGGCGAGTGGACACTCATGTGCCCGAA 827285
Query 53743 CGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
||| || || || || || || || ||||| |||||
Sbjct 827284 CGAATGTCCTGGTCTAGCGGACGTTTATGGTGATGAGTT 827246
Score = 118 bits (130), Expect = 1e-21
Identities = 305/455 (67%), Gaps = 15/455 (3%)
Strand=Plus/Minus
Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537
||||| ||||||||||| |||||||| || ||||| || || || || ||||||| |
Sbjct 826520 GGCCTCCGCAACTCCCTTCTCGTGGCTCCTATGCCGACTGCCTCTACATCTCAGATTCTC 826461
Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597
|| |||||||| || ||||| || || ||||||||||| ||||| || ||
Sbjct 826460 GGTAACAACGAATGCTTTGAGCCTTATACCTCCAACATCTACTCCCGCCGTGTTCTCGCT 826401
Query 55598 GGTGAGTTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAA 55653
|| ||||| || |||| ||| | ||| || ||| || || | || |
Sbjct 826400 GGCGAGTTC--CA-GATCGTCAATC-CCTGGTTGCTCAAAGATCTTGTCGACATGGGCTT 826345
Query 55654 GTGGAACCCGCAGATCAAGAC--GGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATC 55709
|||| | | || |||| |||| | || ||| || || || | ||| |||
Sbjct 826344 GTGGTCCGACAACATGAAGAATAGGATCATC-GCCGAA-GGTGGCTCTATTCAGCGGATC 826287
Query 55710 TGGAGATTCCTCTGCG-TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAG 55768
| ||| | | | |||| | | ||| ||| |||||||| || ||||||
Sbjct 826286 CCCAACATCCCCGATGATATCAAAGCACTCTACAAGACTGTGTGGGAAATCTCACAGAGA 826227
Query 55769 AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828
| | | | ||| ||| |||||||| || | |||||||||||| |||||||| ||
Sbjct 826226 CATATCCTGCAGATGGCTGCAGATCGTGGCGCCTTCATCGACCAGTCTCAGTCTCTCAAT 826167
Query 55829 ATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAG 55888
||| |||| || | ||| | ||| |||| | | ||| ||||||||| |||||||||
Sbjct 826166 ATCCACATGAAGGAACCTACCATGGGCAAGATCACCTCTATGCACTTTGCTGGGTGGAAG 826107
Query 55889 AAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
|| ||||||||||| |||||||| || || ||
Sbjct 826106 CTCGGTCTCAAGACGGGCATGTACTACCTTCGAAC 826072
>seq1
Length=5232100
Score = 105 bits (116), Expect = 7e-18
Identities = 302/458 (66%), Gaps = 15/458 (3%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| |||||||| ||||| || || ||||||||||| || |||| ||||||||||||||
Sbjct 3073042 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTCTCCATG 3073101
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA---TAGGCTTCTCCCCAAACTGTGCCATGAGG 74579
||||||| ||||| | || ||||| | || || | | || | || ||
Sbjct 3073102 AAGTCGAAGGGGTTGGTGGCGTTGTAAACCTTGGGATTGCCGAGAGACAATAGCA---GG 3073158
Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639
|| || || || || | ||||| || ||| || | | ||| |||| || |
Sbjct 3073159 CGGTCGGCGACGAACTCGATGTATTGGCACATCAGACCAGAGTTCATACCGAGCAGCGCG 3073218
Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTG 74699
|| |||||||||||||||| ||||| ||| | || | ||| || || |
Sbjct 3073219 CAAGGCAGTGCCTCGGTGAGGAACTCTTGCTCGATCTTGACCGCCTCGGTGATGATGTGC 3073278
Query 74700 TGAATGTCTTT---GGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAA 74755
| | || || | |||| | | | || | ||| | || | || ||| ||
Sbjct 3073279 TCGACCTCCTTCTTGCTTGGGCGTGTGT---TGAGAAGGGAGAAGAGGAGGCA-GGCGAA 3073334
Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815
|| ||| ||| ||||| | || | ||||||||| || | ||||| |||||
Sbjct 3073335 GTCGGTGTGCATGCCCTCATCACGAGAGATGAGTTCATTCGAGAAGGTCAGGCCGGGCAT 3073394
Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875
|| || |||||||| | ||| ||||||| |||||| ||||||||||| || || ||
Sbjct 3073395 GAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGATCCACTGAAGAAAATACCCTC 3073454
Query 74876 GACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG 74913
|||| |||||||| ||||| || |||||| ||||
Sbjct 3073455 GACAGCGGCAAAGGCTACAAGACGCGACGCGAA-GGTG 3073491
Score = 87.8 bits (96), Expect = 2e-12
Identities = 168/247 (68%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081
|||| |||| || |||||||||||||| || || ||| | | |||| | | |
Sbjct 3073657 TGTCGATCAACAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCAT 3073716
Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCA 75141
|||| | |||||||||| || ||||| || ||| | | | | ||||||
Sbjct 3073717 AGAAGCATCGCGCCTCTGGTATTTGTACCTCGCCGCTAAAGCGCTCGACCAGATTCTCGT 3073776
Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201
||||||||||||| || |||||||| || || || || | || ||| ||||||||
Sbjct 3073777 TGACGATGCCGTCGGATGCGGCGAAGAAGGCGAGGACGTGTGAAATGAAGAAGCGCTCAT 3073836
Query 75202 CGTCAGTGAG---TTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258
||||| |||| |||| ||| || | ||||| | | ||| ||||| ||| | |
Sbjct 3073837 CGTCATTGAGCCTCTTGTTCCAGTCGTGAAGGTCTTTGGAGAGATCGATCTCTTCGGCGG 3073896
Query 75259 TCCAGAA 75265
|||||||
Sbjct 3073897 TCCAGAA 3073903
>seq3
Length=4703234
Score = 93.3 bits (102), Expect = 5e-14
Identities = 194/285 (68%), Gaps = 8/285 (3%)
Strand=Plus/Plus
Query 118016 CCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGT 118075
||||||||||| ||| || ||||| ||| ||||||||||| | | ||||||| ||
Sbjct 3752003 CCCTTGATATGACTACCATCGTGATCCTGATCAGTCATGATCATGATGTGGCCGTAACGG 3752062
Query 118076 AAATCTCTCAGGGAGT---TATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132
| | ||| ||| || |||| | || |||||| || || | || |||||| | |
Sbjct 3752063 AGACCTC---GGGCGTCGGTATACTCTTTCTTATGTTGCAGGCCAATGAACTTTTTGATG 3752119
Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGC 118192
|| || || | |||| | | || | |||| || ||||| ||||| || |
Sbjct 3752120 TTCTGAATCTCAACGTTTTTGGATATTTGATCAATGGATGCATCCCGTACGTTCAGCATC 3752179
Query 118193 TTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAAC-GCTCAAGCCGGCAAT 118251
||||| || || || || |||||||| ||| || ||||| |||| |||||| |
Sbjct 3752180 TTACCACGAAGAGGGAAGACGCCAAAAAGGTCTGGGTTTACAACGGCTC-GGCCGGCCAA 3752238
Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCA 118296
|||||| | || ||||| |||||||||| ||| | |||||
Sbjct 3752239 AGCAAGCAAACTAGCGGAGTCTCCCTCGGTAAGAATCAAGGTGCA 3752283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215657990000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |