Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9 122 8e-23 >seq9 Length=2409284 Score = 122 bits (134), Expect = 8e-23 Identities = 193/273 (71%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA-GCGGGGGT-TCCCATCTC 34385 ||||||||||||| ||||||| || | ||| || ||| | ||| | ||||| | | Sbjct 2040659 AAGATCTGGGACGGGAACGGGTCGCGCGCCTTCCTCGACTCTGTGGGCCTCTCCCACCAC 2040718 Query 34386 GGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGT 34445 | |||||||||| |||| || || ||||| || |||||| | |||||||| || |||| Sbjct 2040719 G--AGGAGGGCGATCTGGGGCCTGTATACGGCTTTCAGTGGCGGCACTTTGGCGCCGAGT 2040776 Query 34446 ATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCG 34505 | ||| ||| | |||||| | |||||||| | ||||| || | || |||| Sbjct 2040777 ACAAAGGGCACGATGTGGACTACACAGGACAGGGCGTCGACCAATTGGCCGAAGTCATCG 2040836 Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565 | | |||| || || |||||||| |||| | || | |||||||||||| || Sbjct 2040837 ATAAACTGAAAAACAAGCCGTATGACAGACGGATTATACTGAGTGCGTGGAACCCGGCGG 2040896 Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 |||| ||||||||| || |||||||||| Sbjct 2040897 ATCTGAAGAAGATGGCGCTTCCGCCGTGCCACA 2040929 Score = 122 bits (134), Expect = 8e-23 Identities = 193/273 (71%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||||||||| || ||||||||| |||||| |||||||||||| | || | | Sbjct 2040929 TGTGGCACGGCGGAAGCGCCATCTTCTTCAGATCCGCCGGGTTCCACGCACTCAGTATAA 2040870 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866 ||| |||||||| || || |||| | ||||| || | || ||||| | | Sbjct 2040869 TCCGTCTGTCATACGGCTTGTTTTTCAGTTTATCGATGACTTCGGCCAATTGGTCGACGC 2040810 Query 6867 CCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGA 6926 ||||||| | |||||| | ||| ||| ||||| || |||||||| | |||||| | Sbjct 2040809 CCTGTCCTGTGTAGTCCACATCGTGCCCTTTGTACTCGGCGCCAAAGTGCCGCCACTGAA 2040750 Query 6927 ACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCCCCGC-TTGTCCAG 6984 | ||||| || || |||| |||||||||| || | ||||| | ||| | ||| || Sbjct 2040749 AGCCGTATACAGGCCCCAGATCGCCCTCCT--CGTGGTGGGAGAGGCCCACAGAGTCGAG 2040692 Query 6985 AAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 ||| | || ||||||| ||||||||||||| Sbjct 2040691 GAAGGCGCGCGACCCGTTCCCGTCCCAGATCTT 2040659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262119836000