Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=4703234 Score = 111 bits (122), Expect = 1e-19 Identities = 155/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || || || || || || ||||||| || ||||| |||| || Sbjct 3808943 CACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTC 3808884 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||| |||||||| || || || ||||||||||| |||||| | || ||| |||||| Sbjct 3808883 GAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTGTCCT 3808825 Query 39194 TGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| ||| |||| ||| | | | || ||||| ||||| || || | ||| || | Sbjct 3808824 GGATCTTCGACTTGA-CGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTC 3808766 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || || ||||||||||| Sbjct 3808765 TTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545338245650