Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
>seq3
Length=4703234
Score = 111 bits (122), Expect = 1e-19
Identities = 155/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || || || || || || || ||||||| || ||||| |||| ||
Sbjct 3808943 CACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGGCCGTCTTC 3808884
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
||||| |||||||| || || || ||||||||||| |||||| | || ||| ||||||
Sbjct 3808883 GAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTGTCCT 3808825
Query 39194 TGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252
||| ||| |||| ||| | | | || ||||| ||||| || || | ||| || |
Sbjct 3808824 GGATCTTCGACTTGA-CGTTGTCGATGGTGTCGCTGGACTCGACCTCGAGCGTAATGGTC 3808766
Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || ||||| || || || |||||||||||
Sbjct 3808765 TTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545338245650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |