Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
>seq3
Length=4703234
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || || || ||||| || ||||| ||||| || ||
Sbjct 3808278 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTTGAATCATCG 3808337
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || | || ||||| || || | || || |||||
Sbjct 3808338 GATACCATTGACAATGTCAAGTCGAAGA-TTCAGGACAAGGAGGGCATTCCTCCGGATCA 3808396
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || || || ||||| || || ||||||| || ||| | ||| |||||
Sbjct 3808397 ACAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGAACTCTCTCCGACTACAA 3808456
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819
||| || || |||||||| |||| || ||
Sbjct 3808457 CATCCAGAAGGAGTCCACCCTACACTTGGT 3808486
Score = 82.4 bits (90), Expect = 5e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || || || |||||||| ||||| || || || ||
Sbjct 3808050 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTGGAATCATCG 3808109
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || || ||||| || || | || || ||||||
Sbjct 3808110 GATACCATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAA 3808169
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || ||||| || || || || | ||||| || ||| ||||||
Sbjct 3808170 CAGCGACTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTATCCGACTACAAC 3808229
Query 23791 ATACAAAAAGAGTCCACA 23808
|| || || ||||| |||
Sbjct 3808230 ATCCAGAAGGAGTCTACA 3808247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009394025400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |