Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 174 2e-38 >seq4 Length=3241893 Score = 174 bits (192), Expect = 2e-38 Identities = 594/916 (65%), Gaps = 20/916 (2%) Strand=Plus/Plus Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971 ||| |||||| || || ||||| || |||| || | | ||||| ||||| || || Sbjct 827230 AGTGTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGG 827289 Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031 |||||| | || ||| || || | |||| || || ||||| || || || || ||||| Sbjct 827290 GCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCA 827349 Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091 | || ||||| || || | | | |||||| || || |||||| || || Sbjct 827350 CAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTC 827409 Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151 || || | | || || | |||||||| || || || || || | | || || || Sbjct 827410 AAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCG 827469 Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211 ||| || || || ||||| | ||| || ||||| || || || || | | ||| || || Sbjct 827470 TTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGAT 827529 Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271 | |||||| || || |||||||||||| ||| || || | || ||||| | Sbjct 827530 GAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAAT----CC 827585 Query 78272 AATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TTCAAT 78326 |||| || || || || ||||| | || || || | |||| |||| |||| | Sbjct 827586 GGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGC-ACGTCTTCAGT 827644 Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 78386 || || ||||| ||||| || ||||| ||| |||| | | || || ||| |||||| Sbjct 827645 GTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATT 827704 Query 78387 T--GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA-TTTT 78443 | | |||| || || ||||| || | ||||| || || || || || | || Sbjct 827705 TGGGGCGATG--GGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGC 827762 Query 78444 TCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACC 78503 || | ||| ||||||||| ||||| || || ||||| ||| || || || Sbjct 827763 TCGACATGTA-ATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACG 827821 Query 78504 GCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAG 78563 | |||||||||| ||| || || || | || | | || | ||||| | | | Sbjct 827822 GACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGG 827881 Query 78564 TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATA 78623 ||||| ||| | ||| || ||||| || | | ||| ||||| | ||||| | Sbjct 827882 TATGAGCGTTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACG 827941 Query 78624 ATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATA 78683 ||| | || || || | || || ||| | || || || ||| | ||||||| Sbjct 827942 ATAGCGGAGTTGAGATCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATC 828001 Query 78684 ATAGG--AGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACAT 78741 || || | || | ||||| || || || ||||| || | | |||| | ||| Sbjct 828002 ATCGGCTGGCTCTT--GCCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAA 828059 Query 78742 CACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAA 78801 | ||| | ||||| |||| ||||| ||||| || ||||| || | ||| || || | Sbjct 828060 CCGAGAATTGCTTTTTGGTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGA 828119 Query 78802 TAGCATAATCAGGATG 78817 | ||||| || ||||| Sbjct 828120 TGGCATATTCGGGATG 828135 Score = 107 bits (118), Expect = 3e-18 Identities = 391/605 (65%), Gaps = 9/605 (1%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || |||| ||| || | | || || || |||||||| || || || ||| Sbjct 826042 GTGAACTGGATGGGAGCAGAAGCCGCCATCGTTCGAAGGTAGTACATGCCCGTCTTGAGA 826101 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || || ||||| || | ||| |||| || || Sbjct 826102 CCGAGCTTCCACCCAGCAAAGTGCATAGAGGTGATCTTGCCCATGGTAGGTTCCTTCATG 826161 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || ||||| | |||||| || |||||||| || || | ||| || ||||| | | Sbjct 826162 TGGATATTGAGAGACTGAGACTGGTCGATGAAGGCGCCACGATCTGCAGCCATCTGCAGG 826221 Query 76962 ATG-GTCTTT-TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 || |||| | |||| |||||||| | ||| ||| | | | |||||||||||| || | Sbjct 826222 ATATGTCTCTGTGAG--ATTTCCCACACAGTCTTGTAGAGTGCTTTGATATCATCGGGGA 826279 Query 77020 GGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCAT 77076 ||| | | ||||| || ||||| || | || || ||||||| || | || Sbjct 826280 TGTTGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCTTCATGTTGTCGG 826339 Query 77077 TCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTC 77136 |||||| | | || | | || | || | ||||| || || || || || | Sbjct 826340 ACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGATCTGGAACTCGC 826399 Query 77137 CAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 77196 ||| | || | || | ||| || || |||||| || || | |||| ||||| | Sbjct 826400 CAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGCATTCGTTGTTAC 826459 Query 77197 CCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 77256 | | ||| |||| ||||| ||||| |||||||| ||||| | | || | ||| | Sbjct 826460 CGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGGAGTTGCGGAGGC 826519 Query 77257 CATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACAT 77316 ||||| || | | |||| ||| | ||| ||||||||||| | || |||| Sbjct 826520 CATGTTGGGCAATCTCAGCTTTGAGAGCATCCCAGTCCCAAAGATCAGTGGGGGTGACAT 826579 Query 77317 CCCAAAGATCGTATTGTAGAATTCCGTTACTA-GCATATGATCCATTATATGTTTCATAA 77375 ||| | || ||||| ||||| || || | | ||| || || | ||| | |||||| Sbjct 826580 TCCACATGTCATATTGAAGAATGCC-TTGCGAGGCAGGGGAGCCTTCATAGGATTCATAG 826638 Query 77376 GGTCC 77380 ||||| Sbjct 826639 GGTCC 826643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668365832000