Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4 174 2e-38
>seq4
Length=3241893
Score = 174 bits (192), Expect = 2e-38
Identities = 594/916 (65%), Gaps = 20/916 (2%)
Strand=Plus/Plus
Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971
||| |||||| || || ||||| || |||| || | | ||||| ||||| || ||
Sbjct 827230 AGTGTATAGCTCCTCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGG 827289
Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031
|||||| | || ||| || || | |||| || || ||||| || || || || |||||
Sbjct 827290 GCACATGAGTGTCCACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCA 827349
Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091
| || ||||| || || | | | |||||| || || |||||| || ||
Sbjct 827350 CAACGCGTAAAATAAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTC 827409
Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || | | || || | |||||||| || || || || || | | || || ||
Sbjct 827410 AAGGAAGCCGAAAACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCG 827469
Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211
||| || || || ||||| | ||| || ||||| || || || || | | ||| || ||
Sbjct 827470 TTTGTTGCCGCCTTGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGAT 827529
Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271
| |||||| || || |||||||||||| ||| || || | || ||||| |
Sbjct 827530 GAGACCGTTCGACGTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAAT----CC 827585
Query 78272 AATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TTCAAT 78326
|||| || || || || ||||| | || || || | |||| |||| |||| |
Sbjct 827586 GGTGGACATTCAGACCAATACCGCCTGCGGTTTTGGAGATCATGGCGC-ACGTCTTCAGT 827644
Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 78386
|| || ||||| ||||| || ||||| ||| |||| | | || || ||| ||||||
Sbjct 827645 GTGTCATAGATGCCCTCGATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATT 827704
Query 78387 T--GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA-TTTT 78443
| | |||| || || ||||| || | ||||| || || || || || | ||
Sbjct 827705 TGGGGCGATG--GGGTCCCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGC 827762
Query 78444 TCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACC 78503
|| | ||| ||||||||| ||||| || || ||||| ||| || || ||
Sbjct 827763 TCGACATGTA-ATTGTATGTCTCAATTGCCTTATCGATGTCTTCGCCATGTATGCCGACG 827821
Query 78504 GCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAG 78563
| |||||||||| ||| || || || | || | | || | ||||| | | |
Sbjct 827822 GACACACGCATCAGCATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGG 827881
Query 78564 TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATA 78623
||||| ||| | ||| || ||||| || | | ||| ||||| | ||||| |
Sbjct 827882 TATGAGCGTTCAAGAGTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACG 827941
Query 78624 ATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATA 78683
||| | || || || | || || ||| | || || || ||| | |||||||
Sbjct 827942 ATAGCGGAGTTGAGATCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATC 828001
Query 78684 ATAGG--AGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACAT 78741
|| || | || | ||||| || || || ||||| || | | |||| | |||
Sbjct 828002 ATCGGCTGGCTCTT--GCCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAA 828059
Query 78742 CACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAA 78801
| ||| | ||||| |||| ||||| ||||| || ||||| || | ||| || || |
Sbjct 828060 CCGAGAATTGCTTTTTGGTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGA 828119
Query 78802 TAGCATAATCAGGATG 78817
| ||||| || |||||
Sbjct 828120 TGGCATATTCGGGATG 828135
Score = 107 bits (118), Expect = 3e-18
Identities = 391/605 (65%), Gaps = 9/605 (1%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || |||| ||| || | | || || || |||||||| || || || |||
Sbjct 826042 GTGAACTGGATGGGAGCAGAAGCCGCCATCGTTCGAAGGTAGTACATGCCCGTCTTGAGA 826101
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| || || ||||| || | ||| |||| || ||
Sbjct 826102 CCGAGCTTCCACCCAGCAAAGTGCATAGAGGTGATCTTGCCCATGGTAGGTTCCTTCATG 826161
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|| ||||| | |||||| || |||||||| || || | ||| || ||||| | |
Sbjct 826162 TGGATATTGAGAGACTGAGACTGGTCGATGAAGGCGCCACGATCTGCAGCCATCTGCAGG 826221
Query 76962 ATG-GTCTTT-TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
|| |||| | |||| |||||||| | ||| ||| | | | |||||||||||| || |
Sbjct 826222 ATATGTCTCTGTGAG--ATTTCCCACACAGTCTTGTAGAGTGCTTTGATATCATCGGGGA 826279
Query 77020 GGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCAT 77076
||| | | ||||| || ||||| || | || || ||||||| || | ||
Sbjct 826280 TGTTGGGGATCCGCTGAATAGAGCCACCTTCGGCGATGATCCTATTCTTCATGTTGTCGG 826339
Query 77077 TCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTC 77136
|||||| | | || | | || | || | ||||| || || || || || |
Sbjct 826340 ACCACAAGCCCATGTCGACAAGATCTTTGAGCAACCAGGGATTGACGATCTGGAACTCGC 826399
Query 77137 CAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTC 77196
||| | || | || | ||| || || |||||| || || | |||| ||||| |
Sbjct 826400 CAGCGAGAACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCAAAGCATTCGTTGTTAC 826459
Query 77197 CCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGAC 77256
| | ||| |||| ||||| ||||| |||||||| ||||| | | || | ||| |
Sbjct 826460 CGAGAATCTGAGATGTAGAGGCAGTCGGCATAGGAGCCACGAGAAGGGAGTTGCGGAGGC 826519
Query 77257 CATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACAT 77316
||||| || | | |||| ||| | ||| ||||||||||| | || ||||
Sbjct 826520 CATGTTGGGCAATCTCAGCTTTGAGAGCATCCCAGTCCCAAAGATCAGTGGGGGTGACAT 826579
Query 77317 CCCAAAGATCGTATTGTAGAATTCCGTTACTA-GCATATGATCCATTATATGTTTCATAA 77375
||| | || ||||| ||||| || || | | ||| || || | ||| | ||||||
Sbjct 826580 TCCACATGTCATATTGAAGAATGCC-TTGCGAGGCAGGGGAGCCTTCATAGGATTCATAG 826638
Query 77376 GGTCC 77380
|||||
Sbjct 826639 GGTCC 826643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668365832000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |