Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 190 3e-43 >seq4 Length=3241893 Score = 190 bits (210), Expect = 3e-43 Identities = 587/899 (65%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || |||| || | | |||||||||||| ||||| ||||| | || | Sbjct 827243 TCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGTC 827302 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| || | |||| || || ||||| || || || || ||||| | || |||| Sbjct 827303 CACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAAT 827362 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | || || | | | |||||| || || |||||| || || ||||| | | | Sbjct 827363 AAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAA 827422 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | || | |||||||| || || || || || | |||| || ||||| || || || Sbjct 827423 ACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCT 827482 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | ||| || || || || || || || | | ||| || || | ||||| || Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 || |||||||||||| ||| || || |||||||| | | || || Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCA 827602 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTC 76938 || || ||||| |||| ||||| | || || ||| |||| |||||||||||||||||| Sbjct 827603 ATACCGCCTGCGGTTTTGGAGATCATGGCGCA-CGTCTTCAGTGTGTCATAGATGCCCTC 827661 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT--GATGATGAACAGTT 76996 || || || ||| |||| | | || || ||| ||||||| | |||| || Sbjct 827662 GATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGATG--GGGTC 827719 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA-TTTTTCAGAAAGTAGATTGTA 77055 || ||||| || | || || || || || ||||| | || || | ||| |||||| Sbjct 827720 CCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACATGTA-ATTGTA 827778 Query 77056 TGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAAC 77113 ||| ||||| | ||| | || | | | ||| || || || | |||||||||| | Sbjct 827779 TGTCTCAATTGC--CTTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGC 827836 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173 || || || || || || || | || | ||||| | | |||||| ||| | | Sbjct 827837 ATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGA 827896 Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233 || || ||||| || | | ||| ||||| | ||||| | ||| | || || || Sbjct 827897 GTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGAGTTGAGA 827956 Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293 | ||| | ||| | || || || ||| | | ||||| || || | | Sbjct 827957 TCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATCATCGGCTGGCTCTTG 828016 Query 77294 CCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttttt 77353 ||||| || || || ||||| || | | ||||| | || | ||| | ||||| Sbjct 828017 CCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTGCTTTTTG 828076 Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 |||| ||||| |||||||| || || || | || || || || ||||| || ||||| Sbjct 828077 GTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTCGGGATG 828135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933954416000