Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03-
01] 50 sequences; 45,966,240 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq4 190 3e-43
>seq4
Length=3241893
Score = 190 bits (210), Expect = 3e-43
Identities = 587/899 (65%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| || ||||| || |||| || | | |||||||||||| ||||| ||||| | || |
Sbjct 827243 TCGAACTCATCACCATAAACGTCCGCTAGACCAGGACATTCGTTCGGGCACATGAGTGTC 827302
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
||||| || | |||| || || ||||| || || || || ||||| | || ||||
Sbjct 827303 CACTCGCCGTTCTCCTGCACGCGCTTCATGAACAGGTCCGGAATCCACAACGCGTAAAAT 827362
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
| || || | | | |||||| || || |||||| || || ||||| | | |
Sbjct 827363 AAGTCACGAGCGCGAACTTCTTCTTTGCCATGATTCTTCCGGAGGTCAAGGAAGCCGAAA 827422
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
| || | |||||||| || || || || || | |||| || ||||| || || ||
Sbjct 827423 ACGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAACGCACCTGGGCGTTTGTTGCCGCCT 827482
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
||||| | ||| || || || || || || || | | ||| || || | ||||| ||
Sbjct 827483 TGATCAACATACCTAGCGGTATTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGAC 827542
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
|| |||||||||||| ||| || || |||||||| | | || ||
Sbjct 827543 GTGCCATTTGTTCCACCAATGTAGGCCCCGGTAGCACGAATCCGGTGGACATTCAGACCA 827602
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTC 76938
|| || ||||| |||| ||||| | || || ||| |||| ||||||||||||||||||
Sbjct 827603 ATACCGCCTGCGGTTTTGGAGATCATGGCGCA-CGTCTTCAGTGTGTCATAGATGCCCTC 827661
Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT--GATGATGAACAGTT 76996
|| || || ||| |||| | | || || ||| ||||||| | |||| ||
Sbjct 827662 GATGCTGTCCTCCTTCATATCGATGAGGAAGCAGGAGGACATTTGGGGCGATG--GGGTC 827719
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA-TTTTTCAGAAAGTAGATTGTA 77055
|| ||||| || | || || || || || ||||| | || || | ||| ||||||
Sbjct 827720 CCCGCATTGAAGAGGGTCGGCGAAGCGTGTGTGAAGTACTTGCTCGACATGTA-ATTGTA 827778
Query 77056 TGTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAAC 77113
||| ||||| | ||| | || | | | ||| || || || | |||||||||| |
Sbjct 827779 TGTCTCAATTGC--CTTATCGATGTCTTCGCCATGTATGCCGACGGACACACGCATCAGC 827836
Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173
|| || || || || || || | || | ||||| | | |||||| ||| | |
Sbjct 827837 ATGTGTTGTGGACGCTCGGCAATTTTGTCGTTTATGCGGAGGAGGTATGAGCGTTCAAGA 827896
Query 77174 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233
|| || ||||| || | | ||| ||||| | ||||| | ||| | || || ||
Sbjct 827897 GTCTTGAAACCGAAGAACTGGTAGTTGAAGTCGCGATCGTAGACGATAGCGGAGTTGAGA 827956
Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293
| ||| | ||| | || || || ||| | | ||||| || || | |
Sbjct 827957 TCGTCAGCGTGTTTCATGACGATGTCGTAGACCGACTTTGAAATCATCGGCTGGCTCTTG 828016
Query 77294 CCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttttt 77353
||||| || || || ||||| || | | ||||| | || | ||| | |||||
Sbjct 828017 CCATTCTTTGGGTTGACATAATTGTAGAGGTCTTGTACGACAACCGAGAATTGCTTTTTG 828076
Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
|||| ||||| |||||||| || || || | || || || || ||||| || |||||
Sbjct 828077 GTTTGTTTGTGGAGATTCGAGACAGCGATACGTGCTGCGAGGATGGCATATTCGGGATG 828135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933954416000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |