Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 168 1e-36 seq7 105 1e-17 seq8 104 5e-17 >seq3 Length=4703234 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || || || |||||||||||||| | Sbjct 3808277 ACCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGA 3808218 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||| | || ||||| || || Sbjct 3808217 TAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGG 3808158 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| || ||||| | ||| || Sbjct 3808157 GATGCCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGATGATTCCAC 3808098 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 3808097 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808050 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| |||| ||| || || |||||||||||||| | Sbjct 3808505 ACCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3808446 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || || || ||||| | ||| ||||| || || Sbjct 3808445 GAGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGG 3808386 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | || || || ||||| | ||| || Sbjct 3808385 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAAC 3808326 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || ||||| ||||| ||||| |||||||| Sbjct 3808325 CTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || |||| || | || || || |||||||||||||| Sbjct 3808733 ACCACCGCGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGCT 3808674 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||| ||||||||||| || || || ||||| ||||| | ||| ||||| || || Sbjct 3808673 CAACGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGGGG 3808614 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | |||||||| || || | ||| || Sbjct 3808613 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATAGTATCGGATGATTCAAC 3808554 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | ||||| ||||| || ||||| Sbjct 3808553 CTCAAGCGTAATGGTCTTGCCGGTAAGCGTCTTGACGAAAATTTGCAT 3808506 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| || || || | || || || |||||||||||||| | Sbjct 3808048 CCACCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAT 3807989 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || ||||| |||||||| || || ||||| ||| Sbjct 3807988 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 3807929 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 3807928 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATTGTGTCAGAGGACTCCACC 3807869 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 3807868 TCGAGGGTGATGGTCTTGCCGGT 3807846 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || || |||| || | || ||| || || |||||||| || | Sbjct 3808960 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAG 3808901 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || || || || || || ||||| | || || ||||| || Sbjct 3808900 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3808841 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | ||||| ||||| | ||||| Sbjct 3808840 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 3808781 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || |||| |||||| ||||| || ||||| Sbjct 3808780 TCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734 >seq7 Length=3010262 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| |||||||| | ||| || || ||||||||||| || Sbjct 2377812 CCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCTG 2377871 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || || || ||||| | ||| |||||||| || Sbjct 2377872 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGGG 2377931 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 || || || ||||| |||||||| | ||| || |||| Sbjct 2377932 ATGCCTTCTTTGTCCTGGATCTTGGATTTGACATTATC 2377969 >seq8 Length=2851179 Score = 104 bits (114), Expect = 5e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| || || || | || || || |||||||||||||| | | Sbjct 895292 CCTCCACGCAGACGAAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 895233 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || ||||| |||||||| || || ||||| ||| Sbjct 895232 AGGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 895173 Query 282993 ATACCCTCCTTGTCTTG 283009 || |||||||||||||| Sbjct 895172 ATGCCCTCCTTGTCTTG 895156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738529432700