Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Beverwykella_20pulmonaria_20[genbank_20GCA_5F001599595.1_202016-03- 01] 50 sequences; 45,966,240 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 156 4e-33 seq7 120 3e-22 >seq3 Length=4703234 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| ||||| || |||||||||||||| || |||||| Sbjct 3808960 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTCGATTCCTTCTGAATGTTGTAATCGGAG 3808901 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||| ||||| || || ||||| ||||||| || Sbjct 3808900 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3808841 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||||| ||||| || Sbjct 3808840 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTGTCGCTGGACTCGAC 3808782 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| || || || || ||||| ||||| ||||| || ||||| Sbjct 3808781 CTCGAGCGTAATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 3808734 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||||||||| | ||||| || || ||| ||||||||| ||||| ||||||||| Sbjct 3808504 CCACCGCGTAGACGGAGCACCAAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3808445 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||| ||||| || || |||||||| |||| ||| Sbjct 3808444 AGAGTTCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGATCCGGAGGA 3808385 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | || | | | || || || || || Sbjct 3808384 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCAATGGTATCCGATGATTCAAC 3808326 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || || |||| ||||| ||||| |||||||| Sbjct 3808325 CTCGAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3808278 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 3808276 CCACCACGGAGACGAAGGACGAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAT 3808217 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||| ||||| || || |||||||| |||| || Sbjct 3808216 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCCGGAGGG 3808157 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | || || || ||||| Sbjct 3808156 ATGCCCTCCTTGTCCTGGATCTTCGACTTC-ACGTTGTCGATGGTATCCGATGATTCCAC 3808098 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | ||| ||||| || || |||| ||||| ||||| ||||||||| Sbjct 3808097 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATG 3808049 Score = 122 bits (134), Expect = 8e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 3808049 GCCACCGCGGAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 3807990 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||||||||| |||| |||||| ||||||| || Sbjct 3807989 TAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGG 3807930 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 | || |||||||||| ||| || ||||| Sbjct 3807929 GATGCCCTCCTTGTCCTGGATCTTGGACTTCA 3807898 >seq7 Length=3010262 Score = 120 bits (132), Expect = 3e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||||||||||||| ||||||||| ||||| || ||| Sbjct 2377811 GCCGCCACGCAGACGAAGGACCAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCGCT 2377870 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| |||||||||||||| ||||| || || ||||||||||| | ||| Sbjct 2377871 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGGGG 2377930 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 | || || |||||| ||| || Sbjct 2377931 GATGCCTTCTTTGTCCTGGATCTT 2377954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303711060000