Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1363 147 5e-30 >seq1363 Length=52244 Score = 147 bits (162), Expect = 5e-30 Identities = 289/421 (69%), Gaps = 16/421 (4%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| ||| |||||||||| || | | || |||||| ||| Sbjct 38501 CCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTTACTTTCTCCAACGAGCTCA 38560 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGC-----GAGCTTATGTATTCAAAGC 230350 || ||| |||||||| | || || | | |||| | | ||| | | ||| | | Sbjct 38561 TCTCTCGTGACGAGGGCATGCA-CACCGACTTCGCCTGCCTGCTCTTCTCTCTTCTCAAC 38619 Query 230351 TCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410 || | | ||| | ||| | ||| | ||||| || || || |||| | | Sbjct 38620 ACCCGCCCCAGCAAG-----GAGTCTGTCCAGGCCATCATCACCGAGGCTGTTGCCATTG 38674 Query 230411 AAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTT 230469 | | |||||| || | ||||| | ||||| ||| || | ||||||||||| | || Sbjct 38675 AGCAAGAGTTCCTTAGCGACGCCCTGCCATG-CGCTTTGCTCGGCATGAACGCCAAGCTC 38733 Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||| || ||||| || ||||| | || | || || || || || Sbjct 38734 ATGTGCCAGTACATTGAGTTCGTTGCTGACCGTCTGCTTCTCGCTCTGGGCAACACCAAG 38793 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 || ||| || | | ||||||||| | || |||||| ||| |||||| || |||||| Sbjct 38794 GTCTACCACGCCACGAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACC 38853 Query 230590 AACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAG 230647 ||||||||||| ||||||||| ||||||| |||| | ||||||| ||| |||| | ||| Sbjct 38854 AACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATGGCAAGCACAAAG 38913 Query 230648 A 230648 | Sbjct 38914 A 38914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801772473200