Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq349 104 5e-17 >seq349 Length=109538 Score = 104 bits (114), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 254195 ACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGA 254254 ||||| || || || ||||| || | | || |||||||| |||| ||||||| || Sbjct 60494 ACCCG--TGCCCACCCTTCAAAATCATCGTTCTCGACGAGGCAGACAGCATGACGCAAGA 60437 Query 254255 CGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCT 254314 ||| || ||||| |||||||| || |||||||| || | ||||||| || ||||| Sbjct 60436 CGCACAATCCGCGCTCCGCCGCACAATGGAGACATACAGCCGCATGACGCGCTTCTGCCT 60377 Query 254315 GGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCG 254374 || ||||||||||| | || |||| ||| || || || || ||| |||| || || Sbjct 60376 CGTCTGCAACTACGTCACCCGCATTATCGACCCTCTCGCCTCCCGCTGCTCCAAATTCCG 60317 Query 254375 ATTCAGCACCCTCG 254388 |||| | ||||| Sbjct 60316 CTTCAAAAGCCTCG 60303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073743837483520