Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq50 82.4 7e-11 >seq50 Length=66349 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38341 GTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATT 38400 ||||| | ||||| || || ||||| ||||| || | | || || |||||| Sbjct 63925 GTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCGATGAGGAAGCATGAAGACATC 63866 Query 38401 TGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCC 38460 |||||| | ||||| || || || || | ||| || || || ||| |||| |||||| Sbjct 63865 TGAGGCGAGGGAGTGCCTGCATTGAACAGTGTCGGTGAGGCGTGTGTGAAGTATTTTTGT 63806 Query 38461 GACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGAT 38520 |||| || | ||| || || || | | || || || ||||||||||||| | || Sbjct 63805 GACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATACCAACAGCG 63746 Query 38521 ACCCTCATTAGCATATGTTGTGG 38543 || | ||| ||||| ||||| || Sbjct 63745 ACACGCATGAGCATGTGTTGCGG 63723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468515195241600