Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1500 131 4e-25 >seq1500 Length=44508 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || | || || || ||||| || ||||| || ||| Sbjct 4718 GTGGACTCCTTCTGGATGTTGTAATCGGCAAGCGTCCTGCCGTCCTCAAGTTGCTTACCA 4777 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || |||||||| || || || || ||||||||||| || ||| Sbjct 4778 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTT 4837 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||||||||| | ||| ||||| | ||||| ||||| || || || || Sbjct 4838 ACGTTGTCAATGGTATCGCTTGATTCCACCTCCAAAGTAATCGTCTTGCCGGTGAGAGTC 4897 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 4898 TTGACGAAGATTTGCAT 4914 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| || || ||||| ||||| ||||| | ||||| | || ||||| | || || || Sbjct 4945 TGTCGACTCCTTCTGGATATTGTAGTCGGCAAGAGTACGGCCATCTTCCAACTGCTTGCC 5004 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || || | || || || ||||| || ||||| || |||||||||||||| || Sbjct 5005 CGCAAAGATGAGACGTTGCTGGTCTGGAGGAATACCTTCCTTGTCCTGAATCTTTGCCTT 5064 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||||| || || ||||| || || || ||||| ||||| ||||| Sbjct 5065 GACGTTGTCAATAGTATCCGAAGACTCGACCTCCAGCGTGATGGTCTTTCCAGTCAGTGT 5124 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 5125 CTTGACGAAGATCTGCAT 5142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151374206241120