Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq956 82.4 9e-11 >seq956 Length=78424 Score = 82.4 bits (90), Expect = 9e-11 Identities = 112/155 (72%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 || |||||| |||| ||||| |||||||||||| | | |||||| || || |||| Sbjct 34700 AAGATACCTCAAATTGGTGACAAGTTTGCTTCTCGTCACGGTCAAAAGGGTACTATTGGT 34759 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTG---CCGGATCTT 19468 || | || || ||||| ||||||||||||||| ||| || |||| || ||||| Sbjct 34760 ATCACCTACCGCCAAGAGGATATGCCTTTTACTCGAGAGGG---AGTGACACCAGATCTA 34816 Query 19469 ATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || || ||||| || || | || ||| ||||| Sbjct 34817 ATCATCAACCCTCACGCCATCCCTTCTCGTATGAC 34851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595859784624000