Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1479 109 9e-20 seq1265 107 3e-19 >seq1479 Length=151060 Score = 109 bits (120), Expect = 9e-20 Identities = 85/99 (86%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 145279 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 145337 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| ||||||||||| || ||||||||| |||| Sbjct 145338 CCGTCGTCTTGCTCGTCGTGGCGGTGTCAAGCGTATCTC 145376 >seq1265 Length=144580 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 109723 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 109665 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| |||||||||||||| ||||||||| | |||| Sbjct 109664 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 109624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073700536520