Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1136 140 2e-28 seq168 114 9e-21 >seq1136 Length=7535 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 6108 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6049 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6048 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6014 >seq168 Length=82486 Score = 114 bits (126), Expect = 9e-21 Identities = 206/301 (68%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246 |||| | ||| | |||||||||||||| ||| ||| ||| ||||| | ||||| | Sbjct 65211 ATGTCACCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGATTGAGGGCA 65152 Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC 6306 |||| ||||| || || || |||||||||||| | | |||||| |||||| | Sbjct 65151 AGGGCAACGGCATCAAGACTGTCATTGTCAACCTAACCAGCGTCGCTGGCTCGCTCGCCC 65092 Query 6307 GCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTG 6366 |||| | | || | || || || || | ||||||||| || ||||| | Sbjct 65091 GCCCCCCTGCTCACGTCATCAAGTACTTTGGTTTCGAACTTGGAGCCCAGACAAACACCA 65032 Query 6367 ATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACT 6426 | ||| |||| |||| ||| | ||||| | || || | |||||||||||||| Sbjct 65031 GCCCCAACGACGACCGCTGGATCATCAACGGCGCCCACGACGCCAGCAAGCTGCAGGACT 64972 Query 6427 TACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 || |||||||| ||| |||||| || || || | ||||| | ||||| || |||| Sbjct 64971 ACCTCGACGGCTTCATTTCCAAGTTCGTCCTCTGCAAGAAATGCAAGAACCCCGAAACCG 64912 Query 6487 A 6487 | Sbjct 64911 A 64911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940505242840