Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1500 116 3e-21 >seq1500 Length=44508 Score = 116 bits (128), Expect = 3e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || |||| ||| | ||| || |||| Sbjct 5630 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAGGCG 5571 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || ||||| || || || ||| | || || |||||||| Sbjct 5570 AAGATTCAGGACAAGGAGGGCATCCCACCAGACCAGCAGCGTTTGATCTTCGCCGGCAAG 5511 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | |||| ||||||||||| || ||||||||| Sbjct 5510 CAGCTTGAGGACGGCCGCACCCTTGCCGACTACAACATTCAGAAGGAATCCACC 5457 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| || ||| | ||| | || |||||| | | | Sbjct 4914 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACGATTACTTTGGAGGTGGAATCAAGC 4855 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || ||||| |||||||||||||| || || || || Sbjct 4854 GATACCATTGACAACGTAAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 4795 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || || | ||||| | | || | ||||||||||| Sbjct 4794 CAGCGTCTCATCTTTGCTGGTAAGCAACTTGAGGACGGCAGGACGCTTGCCGATTACAAC 4735 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 4734 ATCCAGAAGGAGTCCAC 4718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || | || || || || || || |||| ||| | ||| || |||| Sbjct 5346 ACCGGAAAGACCATAACCCTCGAGGTTGAGTCCTCCGACACCATCGACAATGTCAAGGCC 5287 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || ||||| || || ||||| || Sbjct 5286 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATTTTCGCCGGAAAG 5227 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | ||||| ||| ||| | |||| ||||||||||| || || || || | ||| Sbjct 5226 CAACTTGAGGACGGCCGAACCCTTGCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 5167 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || |||| || ||| Sbjct 5166 CTCGTCCTCCGTCTGCGTGGTGGT 5143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719610686600