Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1500 127 2e-24 >seq1500 Length=44508 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 |||||||||||| | | || || || | ||| || || || || |||||||||||| Sbjct 4687 ACCGCCACGTAGACGGAGCACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGC 4746 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || | || |||||||| |||||||| ||||||||||||| ||||| ||||| Sbjct 4747 AAGCGTCCTGCCGTCCTCAAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGG 4806 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| |||||| |||| | |||| ||| ||| | ||||| || Sbjct 4807 GATACCCTCCTTGTCCTGAATCTTCGCCTTTACGTTGTCAATGGTATCGCTTGATTCCAC 4866 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||| |||||||| ||||| || || || || ||||| Sbjct 4867 CTCCAAAGTAATCGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 4914 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||||| || || ||||||||||| ||| Sbjct 5141 ATACCACCACGCAGACGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCG 5200 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || |||||||| || || ||| | || |||||||| |||||||| Sbjct 5201 GCAAGGGTTCGGCCGTCCTCAAGTTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGG 5260 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||||| ||| || Sbjct 5261 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCA 5320 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || || ||||| Sbjct 5321 ACCTCGAGGGTTATGGTCTTTCCGGT 5346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126002563680