Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1500 84.2 2e-11 >seq1500 Length=44508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || || ||||| || || |||||||||||||||||| || || Sbjct 5143 ACCACCACGCAGACGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGC 5202 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | ||| |||| || | |||||| ||||| || ||||| |||||||| ||| || Sbjct 5203 AAGGGTTCGGCCGTCCTCAAGTTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGGGG 5262 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 5263 AATGCCCTCCTTGTCC 5278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054463715280