Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq50 242 4e-59 seq1363 120 4e-22 >seq50 Length=66349 Score = 242 bits (268), Expect = 4e-59 Identities = 1112/1742 (64%), Gaps = 39/1742 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCA---GGCATACATATGCATCGAG 113653 |||||||||||||| || |||||||| || ||||||| |||| | ||||||||| Sbjct 65446 CGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCATCCGGCAAAG---TGCATCGAG 65390 Query 113654 GACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG 113713 | | |||| | ||||| | |||| | ||||| || || ||||| ||| Sbjct 65389 GTGATCTTGCCCATGGTTGGCTCCTTCATGTGAATGTTCAGCGACTGTGACTGATCAATG 65330 Query 113714 AAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAG 113771 || ||||| || || ||||| | ||| | | ||| | ||||||||| || | Sbjct 65329 AAAGCACCACGGTCAGCAGCCATCTGAATGA--TGGTTCGCTGCGAGATTTCCCAAACGG 65272 Query 113772 TTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCG 113831 | ||||||| |||| | || || ||||| | ||| || ||||| |||||| Sbjct 65271 TCTTGTAGAGCGTCTTGGTCTCCTCAGGGATGTTGGGGATTCTTGCAATGGAACCACCCT 65212 Query 113832 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 113891 | | ||| | | |||||| | || ||||| || || || | |||||||| | Sbjct 65211 CGGCAATAATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACGAGATCCTTGA 65152 Query 113892 CGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATAT 113948 || ||| | ||||||| |||||||||||||| |||| ||| ||||| | Sbjct 65151 GCAGCCATGGGT--TGACAACCTGGAACTCACCCGCGAGCACACGTCG-AGAGTAGATGT 65095 Query 113949 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGG 114008 | | ||||| ||||| ||||| || ||||| || | || |||| ||| ||||| || | Sbjct 65094 TAGATGTGTACGGCTCGAAGCATTCGTTGTTTCCGAGAATCTGGGAGGTCGAGGCAGTTG 65035 Query 114009 GCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGG 114068 ||||||| || || | | ||| || | ||| | || ||| |||| | Sbjct 65034 GCATGGGAGCGATCAACAAAGAGTTGCGTACACCATGTTGAGCAATCTTGGCCTTCAACT 64975 Query 114069 CGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128 | ||||||| || | | | | | ||||||||| |||| ||| | || | Sbjct 64974 CTGCCCAGTCCCAGAGGTCGGTGGGGGTGACGTTCCACATATCGTACTGAAGGGTTCCCT 64915 Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC--GCCAAT-TCGG 114185 | || | || |||||||| | ||||| ||||| || || |||| | |||| ||| Sbjct 64914 GAGAAACGGGAGATCCCTCGTAGGTCTCATATGGACC---AAGCTCCTTGGCAATGTCGC 64858 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 || | || || ||||| || || ||||| || || | || | ||||| Sbjct 64857 AGGAAGAAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGG 64798 Query 114246 CCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 114305 |||| | || || || | || || | | || |||| || |||||||| || | Sbjct 64797 CCTCTGCCGACTCGAAAGGCAGGCGCAATGCGAGGAAAGCATCGGCCAGACCTTGTACGC 64738 Query 114306 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAAT 114365 | | || || || || || | | || || || ||| ||||| || | Sbjct 64737 CCATACCGATAGGTCGGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACGGGGTAGTGGT 64678 Query 114366 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 114425 | || || | | | || | || ||||||||||| |||| || |||||||| | Sbjct 64677 TGACTTCAATGATCTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGAAGCTTCT 64618 Query 114426 CGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 114485 | | ||||| || | || | | ||| | || ||||| | || || |||| Sbjct 64617 GGAAGTCAAACTCGCCACGCTTGTAGTCAACAAAAGAGGGCAGGGCAAGAGAAGCAAGAT 64558 Query 114486 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 114545 | || |||| |||||| |||||||||| | ||| ||||| |||| || || | Sbjct 64557 TGCAAACAGCAACCTCATCAGGGGCAGTGTACTCGACAATCTCCGTGCACAGGTTGGAGC 64498 Query 114546 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 114605 | || |||||||||||||| || || ||| ||| || ||||||||||| |||| Sbjct 64497 TACGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAGAGCA 64438 Query 114606 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCT 114664 | | || | || || || || |||| | ||| || || | ||| | | || | ||| Sbjct 64437 TAAAGGGGTTACCAGTTTCGGTCTGGGCTTCGAGGATGGCGTACCACAGCTTCTG-GGCG 64379 Query 114665 GGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 114724 | ||||| | | | || || |||||| | ||| || || |||||||| Sbjct 64378 CGGACAGTTTCACGGCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGAGCCTCAAACTCA 64319 Query 114725 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 ||||| | | || | ||| || || || | ||||| | ||||| ||| | || Sbjct 64318 TCACCGTAGACGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGAGTCCACTCCCCG 64259 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 ||||| |||||||||||||| || || |||||||| ||||| |||| ||||| || Sbjct 64258 TTCTCCTGGACACGCTTCATGAACAGATCGGGGATCCACAGAGCGTAGAACAGATCACGG 64199 Query 114845 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 114904 |||| | || || | || || || || | || | ||| | | || ||| ||| Sbjct 64198 GCGCGAACCTCCTCTTTGCCGTGGTTCTTGCGGAGATCAAGGAAGCCAAAGACATCGGCG 64139 Query 114905 TGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCTGGTTT 114958 ||||| || || ||||| | || | | || | ||| | | ||| |||||| Sbjct 64138 TGCCATGGCTCAAGGTAAATGGCAAAAGCACCGGGGCGCTT--GTTG-CCACCCTGGTCG 64082 Query 114959 ACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 115018 || || | || ||| || | || || ||||| ||||||| ||| | ||| || Sbjct 64081 ACGTAGCGAGCAGTGTTGTTGTACACACGGAGCATAGGAATGAGACCGTTTGATGTTCCG 64022 Query 115019 TTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATC-ATGGATGTGCATACCAATA 115075 || || || | || || ||| | | | || | || || |||| || | ||||||| Sbjct 64021 TTGGTGCCACCAATGTATGAGCC--AGTAGCAC-GAATTCGGTGGACGTTGAGACCAATA 63965 Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135 || || || ||| ||||| || || | |||| | ||||||| ||||| || Sbjct 63964 CCGCCAGCGGTCTTGGAGATCAAGGCACAGGTCTTGAGTGTATCGTAGATACCGTCAATG 63905 Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 115195 ||| |||| | |||| |||||||| ||||| || ||| || || || || Sbjct 63904 CTGTCCTCCTTCATATCGATGAGGAAGCATGAAGACATCTGAGGCGAGGGAGTGCCTGCA 63845 Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCC 115255 ||||| || || |||| ||||| |||| ||| ||||| | || |||||||| Sbjct 63844 TTGAACAGTGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTCATAGGTCTCA 63785 Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315 | | | |||||| || ||||||||||| | | ||| ||||| | ||||| ||| Sbjct 63784 ATGGCCTTCTCAATGTCCTCGCCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGC 63725 Query 115316 GG 115317 || Sbjct 63724 GG 63723 >seq1363 Length=52244 Score = 120 bits (132), Expect = 4e-22 Identities = 303/455 (67%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| || || ||||||||||||||||| ||||| || | |||| ||| ||||||| Sbjct 38883 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC-AAGCGAGATGTTCTCCA 38825 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAG 125874 | || || || |||||| | | || | | ||| || ||| | | || || Sbjct 38824 TGAAGTCGAAGGGGTTCGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGAGA--AGCAG 38767 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 ||| || | ||| |||||||||||| |||| || | |||||| |||| | Sbjct 38766 ACGGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAAAGC 38707 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 ||||| || ||||| | |||| | | |||||| | || || || | |||||| Sbjct 38706 GCATGGCAGGGCGTCGCTAAGGAACTCTTGCTCAATGGCAACAGCCTCGGTGATGATGGC 38647 Query 125995 GTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 || | | ||| | || | | ||| | | || |||||| ||| || Sbjct 38646 CTGGACAGACTCCTTGCTGGGGCGGGTGTTGAGAAGAGA---GAAGAGCAGGCAGGCGAA 38590 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| | ||||||||||| |||||||| || || ||||| || || ||||| Sbjct 38589 GTCGGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTAAGACCAGGCAT 38530 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||||| |||||||| | |||||| || | |||||| || ||||||||| ||||| Sbjct 38529 CAGACCACGCTTCTTGAGCCAGAAGATGGATGCAAATGATCCACTGAAGAAGATACCCTC 38470 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || ||||| |||| |||||| | ||||||| Sbjct 38469 GACGGCAGCGAATGCAACGAGACGGTTGGCAAAGG 38435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597341354251200