Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1500 91.5 1e-13 >seq1500 Length=44508 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || || || || || || |||||||||||| || | || |||| || Sbjct 4706 ACCAAGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCAAGCGTCCTGCCGTCCTCA 4765 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || ||||| | || | |||||| ||||| || || || |||||||| | Sbjct 4766 AGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGA 4825 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||||| | || || |||||||| ||| || || || ||||| || || Sbjct 4826 ATCTTCGCCTTTACGTTGTCAATGGTATCGCTTGATTCCACCTCCAAAGTAATCGTCTTG 4885 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || ||||||||| Sbjct 4886 CCGGTGAGAGTCTTGACGAAGATTTGCATA 4915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357384856627400