Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq50 215 6e-51 seq1363 149 8e-31 >seq50 Length=66349 Score = 215 bits (238), Expect = 6e-51 Identities = 1100/1737 (63%), Gaps = 29/1737 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCA---GGCATACATATGCATTGAG 115614 |||||||||||||| || |||||||| || ||||||| |||| | ||||| ||| Sbjct 65446 CGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCATCCGGCAAAG---TGCATCGAG 65390 Query 115615 GACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG 115674 | | |||| | ||||| | |||| | ||||| || || ||||| ||| Sbjct 65389 GTGATCTTGCCCATGGTTGGCTCCTTCATGTGAATGTTCAGCGACTGTGACTGATCAATG 65330 Query 115675 AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAG 115732 || || || || || ||||| | ||| | | ||| | ||||||||| || | Sbjct 65329 AAAGCACCACGGTCAGCAGCCATCTGAATGA--TGGTTCGCTGCGAGATTTCCCAAACGG 65272 Query 115733 TTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTG 115792 | ||||||| |||| | || || ||||| | ||| || || || ||||| Sbjct 65271 TCTTGTAGAGCGTCTTGGTCTCCTCAGGGATGTTGGGGATTCTTGCAATGGAACCACCCT 65212 Query 115793 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA 115852 | | ||| | | |||||| | || ||||| || || || | |||||||| | Sbjct 65211 CGGCAATAATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACGAGATCCTTGA 65152 Query 115853 CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTG 115911 || |||||||| |||||||||||||| |||| ||| |||||||| Sbjct 65151 GCAGCCATGGGTTGACAACCTGGAACTCACCCGCGAGCACACGTCG-AGAGTAGATGTTA 65093 Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971 | ||||| ||||| ||||| || ||||| || | || |||| || ||||| || ||| Sbjct 65092 GATGTGTACGGCTCGAAGCATTCGTTGTTTCCGAGAATCTGGGAGGTCGAGGCAGTTGGC 65033 Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031 ||||| || || | | |||||| | ||| ||| |||| | | Sbjct 65032 ATGGGAGCGATCAACAAAGAGTTGCGTACACCATGTTGAGCAATCTTGGCCTTCAACTCT 64973 Query 116032 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGG 116091 ||||||| || | | | | | ||||||||| |||| ||| | || || Sbjct 64972 GCCCAGTCCCAGAGGTCGGTGGGGGTGACGTTCCACATATCGTACTGAAGGGTTCCCTGA 64913 Query 116092 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAAT-TCGGAG 116148 || | || |||||||| | ||||||||||| || || |||| | |||| ||| || Sbjct 64912 GAAACGGGAGATCCCTCGTAGGTCTCATATGGACC---AAGCTCCTTGGCAATGTCGCAG 64856 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 116208 | || || ||||| || || ||||| || || | || | ||||||| Sbjct 64855 GAAGAAGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCC 64796 Query 116209 TCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 116268 || | || || || | || || | | || |||| || |||||||| || || Sbjct 64795 TCTGCCGACTCGAAAGGCAGGCGCAATGCGAGGAAAGCATCGGCCAGACCTTGTACGCCC 64736 Query 116269 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTC 116328 | || || || || || | | || || || ||| ||||| || || Sbjct 64735 ATACCGATAGGTCGGTGACGGAAGTTGCTGCGGCGTGCCTCCTCAACGGGGTAGTGGTTG 64676 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 || || | | | || | || ||||||||||| |||| || |||||||| | | Sbjct 64675 ACTTCAATGATCTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGAAGCTTCTGG 64616 Query 116389 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | ||||| || | || | | ||| | || ||||| | || || ||||| Sbjct 64615 AAGTCAAACTCGCCACGCTTGTAGTCAACAAAAGAGGGCAGGGCAAGAGAAGCAAGATTG 64556 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 || |||| |||||| |||||||||| | ||| ||||| |||| || || || Sbjct 64555 CAAACAGCAACCTCATCAGGGGCAGTGTACTCGACAATCTCCGTGCACAGGTTGGAGCTA 64496 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 || |||||||||||||| || || ||| ||| || |||||||||||||||||| Sbjct 64495 CGGATAGTGCCCAAGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAGAGCATA 64436 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGG 116627 | || | || || || || |||| | ||| || || | ||| | | || | ||| | Sbjct 64435 AAGGGGTTACCAGTTTCGGTCTGGGCTTCGAGGATGGCGTACCACAGCTTCTG-GGCGCG 64377 Query 116628 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687 ||||| | | | || || |||||| | ||| || ||||||||||| || Sbjct 64376 GACAGTTTCACGGCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGAGCCTCAAACTCATC 64317 Query 116688 ACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACC 116747 ||| | || | ||| || || || | || || | ||||| ||| | || Sbjct 64316 ACCGTAGACGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGAGTCCACTCCCCGTT 64257 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 116807 ||||| || ||||||||||| || || |||||||| || || |||| ||||| || Sbjct 64256 CTCCTGGACACGCTTCATGAACAGATCGGGGATCCACAGAGCGTAGAACAGATCACGGGC 64197 Query 116808 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 116867 |||| | || || | || || || || | || | ||| | | || ||| ||||| Sbjct 64196 GCGAACCTCCTCTTTGCCGTGGTTCTTGCGGAGATCAAGGAAGCCAAAGACATCGGCGTG 64137 Query 116868 CCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATA 116924 ||| || || ||||| | || | | || ||| ||| |||||| || || Sbjct 64136 CCATGGCTCAAGGTAAATGGCAAAAGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTA 64077 Query 116925 CCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 116984 | || || ||| | || || ||||| ||||||| ||| | ||| || || || Sbjct 64076 GCGAGCAGTGTTGTTGTACACACGGAGCATAGGAATGAGACCGTTTGATGTTCCGTTGGT 64017 Query 116985 CCCCCGAA--TACGAGACTTGTTGGCTCTGACATC-GTGGATGTGCATACCAATACCCCC 117041 || | || || ||| | | || | || || ||||| || | ||||||||| || Sbjct 64016 GCCACCAATGTATGAGCC--AGTAGCAC-GAATTCGGTGGACGTTGAGACCAATACCGCC 63960 Query 117042 TGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 117101 || ||| ||||| || || | |||| | ||||||| || || || ||| Sbjct 63959 AGCGGTCTTGGAGATCAAGGCACAGGTCTTGAGTGTATCGTAGATACCGTCAATGCTGTC 63900 Query 117102 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 117161 |||| | ||||||||||||| ||||| || ||| || || || || ||||| Sbjct 63899 CTCCTTCATATCGATGAGGAAGCATGAAGACATCTGAGGCGAGGGAGTGCCTGCATTGAA 63840 Query 117162 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 117221 || || |||| ||||| |||| ||| ||||| | || |||||||| | | | Sbjct 63839 CAGTGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAGTCATAGGTCTCAATGGC 63780 Query 117222 AGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 |||||| || ||||||||||| | | ||| ||||| | ||||| ||| || Sbjct 63779 CTTCTCAATGTCCTCGCCGTGAATACCAACAGCGACACGCATGAGCATGTGTTGCGG 63723 >seq1363 Length=52244 Score = 149 bits (164), Expect = 8e-31 Identities = 311/457 (68%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | || ||| |||||||| Sbjct 38883 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 38824 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || |||||| | | || | | ||| || ||| | | || ||| Sbjct 38823 GAAGTCGAAGGGGTTCGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGAGA--AGCAGA 38766 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || || | ||| |||||||||||| |||| || | |||||| |||| | Sbjct 38765 CGGTCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAAAGCG 38706 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 ||||| || ||||| | |||| | | ||||||| | ||||| || | |||||| Sbjct 38705 CATGGCAGGGCGTCGCTAAGGAACTCTTGCTCAATGGCAACAGCCTCGGTGATGATGGCC 38646 Query 127469 TGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCA--CAG-CA 127522 || | || ||| | || | | ||| | | || |||||| || ||| | Sbjct 38645 TGGACAGACTCCTTGCTGGGGCGGGTGTTGAGAAGAGA---GAAGAG---CAGGCAGGCG 38592 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| | ||||||||||| |||||||| || || ||||| ||||| ||| Sbjct 38591 AAGTCGGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTAAGACCAGGC 38532 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || ||||| |||||||| | |||||| || | |||||| ||| ||||||||| ||| Sbjct 38531 ATCAGACCACGCTTCTTGAGCCAGAAGATGGATGCAAATGATCCACTGAAGAAGATACCC 38472 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || || ||||| |||| ||||| | |||||||| Sbjct 38471 TCGACGGCAGCGAATGCAACGAGACGGTTGGCAAAGG 38435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613494623102400