Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1500 107 8e-18 >seq1500 Length=44508 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||||||||| || || || || || || || || || || Sbjct 5142 ATGCAGATCTTCGTCAAGACACTGACTGGAAAGACCATCACGCTGGAGGTCGAGTCTTCG 5083 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | || ||| ||||| || |||||||| |||||||| || || Sbjct 5082 GATACTATTGACAACGTCAAGGCAAAGATTCAGGACAAGGAAGGTATTCCTCCAGACCAG 5023 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || || | |||||||| | ||| | || || || ||| Sbjct 5022 CAACGTCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGTACTCTTGCCGACTACAAT 4963 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||||||||| || Sbjct 4962 ATCCAGAAGGAGTCGACACTTCACTTGGT 4934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975676885217120