Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bipolaris_20oryzae_20[genbank_20GCA_5F001675385.1_202016-06-22] 1,640 sequences; 31,674,030 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq50 271 9e-68 seq1363 113 6e-20 >seq50 Length=66349 Score = 271 bits (300), Expect = 9e-68 Identities = 1140/1770 (64%), Gaps = 45/1770 (3%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| ||||| | ||||| || || || || ||||| | | |||| Sbjct 63730 ACATGCTCATGCGTGTCGCTGTTGGTATTCACGGCGAGGACATTGAGAAGGCCATTGAGA 63789 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | || ||| | ||||| | |||| ||||| |||| || || ||||| || | Sbjct 63790 CCTATGACTACATGTCACAAAAATACTTCACACACGCCTCACCGACACTGTTCAATGCAG 63849 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | || || || || ||||| || ||||| || | | |||||||| || Sbjct 63850 GCACTCCCTCGCCTCAGATGTCTTCATGCTTCCTCATCGATATGAAGGAGGACAGCATTG 63909 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | || || |||| || |||| |||||| ||||| ||| ||||| ||||| | Sbjct 63910 ACGGTATCTACGATACACTCAAGACCTGTGCCTTGATCTCCAAGACCGCTGGCGGTATTG 63969 Query 111859 GGATGCACATCCAT-GATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGTC 111915 | | || |||| || || | || | | ||| || || | || || || || Sbjct 63970 GTCTCAACGTCCACCGAATTC-GTGCTACT--GGCTCATACATTGGTGGCACCAACGGAA 64026 Query 111916 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACC 111975 |||| | ||| | ||||| ||||| || || | ||| ||| || ||||| || ||| Sbjct 64027 CATCAAACGGTCTCATTCCTATGCTCCGTGTGTACAACAACACTGCTCGCTACGTCGACC 64086 Query 111976 AAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 | | ||| ||| | | || || | || | || ||||||||||||||||| | Sbjct 64087 AGGGTGGCAACAAGCGCCCC---GGTGCTTTTGCCATTTACCTTGAGCCATGGCACGCCG 64143 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCG 112089 || || | | |||||||| | || ||||| || | ||||||| || ||| | Sbjct 64144 ATGTCTTTGGCTTCCTTGATCTCCGCAAGAACCACGGCAAAGAGGAGGTTCGCGCCCGTG 64203 Query 112090 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 112149 |||| |||| |||||| ||||| || ||||| ||||||||| | || |||||| || Sbjct 64204 ATCTGTTCTACGCTCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCCAGGAGAACGGGG 64263 Query 112150 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGT 112209 | ||| ||||| | || || || || ||||| ||| | || | | ||||| |||| Sbjct 64264 AGTGGACTCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCTGACGTCTACGGTGATGAGT 64323 Query 112210 TTGAAGCCCTCTACACAAAGTACGAGGA--AGAAAGTCGGGCGACTGCGACGGTGCCAGC 112267 |||| || || ||| | |||||| | |||| || || || || || | || Sbjct 64324 TTGAGGCTCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCG--TGAAACTGTCCGCGC 64381 Query 112268 TGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 | || | ||||| | || || ||| | | || ||||| ||||||| || | ||||| Sbjct 64382 C-CAGAAGCTGTGGTACGCCATCCTCGAAGCCCAGACCGAAACTGGTAACCCCTTTATGC 64440 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| || || || |||| ||||| || || ||||| ||||| ||| || | Sbjct 64441 TCTACAAGGATGCTTGCAACCGTAAGAGCAACCAGAAGAACTTGGGCACTATCCGTAGCT 64500 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 ||||||| || || || || | || | || | | |||||| ||||| || || | Sbjct 64501 CCAACCTGTGCACGGAGATTGTCGAGTACACTGCCCCTGATGAGGTTGCTGTTTGCAATC 64560 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATTATGAA 112505 | || || | || || ||| | ||| || | | | | | | ||||| | | Sbjct 64561 TTGCTTCTCTTGCCCTGCCCTCTTTTGTTGA-CTACAAGCGTGGCGAGTTTGACTTCCAG 64619 Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565 || || ||||| || || | |||||| ||| | |||| | ||||| || Sbjct 64620 AAGCTTCACGAGGTCACCCAGGTTGTCACCCGCAACTTGAACAAGATCATTGAAGTCAAC 64679 Query 112566 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 |||||||||||| || || || | | ||||| || || ||| | || Sbjct 64680 CACTACCCCGTTGAGGAGGCACGCCGCAGCAACTTCCGTCACCGACCTATCGGTATGGGC 64739 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 || |||||||| || |||| ||| | | ||| |||| | || || || | || || Sbjct 64740 GTACAAGGTCTGGCCGATGCTTTCCTCGCATTG-CGCCTGCCTTTCGAGTCGGCAGAGGC 64798 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||| | |||| | || || ||||| || || ||||| |||||| | | Sbjct 64799 CAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGCTGCTCTTACTTCTTCCTG 64858 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 || | || ||| |||||||||||| |||| ||||| ||||| | ||| || || Sbjct 64859 CGACATTGCCAAGGAGCTTGGTCCATATGAGACCTACGAGGGATCTCCCGTTTCTCAGGG 64918 Query 112805 GGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTC 112863 ||||| | ||||||||| || || | || | | | || ||||||| | Sbjct 64919 AACCCTTCAGTACGATATGTGG-AACGTCACCCCCACCGACCTCTGGGACTGGGCAGAGT 64977 Query 112864 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 112923 | |||| || | | ||| | || ||| | | ||||| || || ||||||| Sbjct 64978 TGAAGGCCAAGATTGCTCAACATGGTGTACGCAACTCTTTGTTGATCGCTCCCATGCCAA 65037 Query 112924 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACA 112983 | ||||| ||| | || || | || || || |||||||| || || ||||| | |||| Sbjct 65038 CTGCCTCGACCTCCCAGATTCTCGGAAACAACGAATGCTTCGAGCCGTACACATCTAACA 65097 Query 112984 TCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGTGG 113040 |||| ||| || | |||||||| ||||| | |||||||| ||| || | Sbjct 65098 TCTACTCTC-GACGTGTGCTCGCGGGTGAGTTCCAGGTTGTCAACC--CATGGCTGCTCA 65154 Query 113041 ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGG 113100 | || ||| || || || || ||||| || | |||||| | | ||| | | || Sbjct 65155 AGGATCTCGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATTATTGCCGAGG 65214 Query 113101 GTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAG 113160 ||||||||||| || || | || || || || | |||| | | ||| || | Sbjct 65215 GTGGTTCCATTGCAAGAATCCCCAACATCCCTGAGGAGACCAAGACGCTCTACAAGACCG 65274 Query 113161 TTTGGGAAATCAAGATG--AAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCAT 113218 ||||||||||| | | || || |||| | ||||| || || |||||| ||||| Sbjct 65275 TTTGGGAAATCTCGCAGCGAACCAT--CATTCAGATGGCTGCTGACCGTGGTGCTTTCAT 65332 Query 113219 TGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCT 113276 ||||| ||||| ||| |||| | |||| | ||||| ||| |||| || | Sbjct 65333 TGATC--AGTCACAGTCGCTGAACATTCACATGAAGGAGCCAACCATGGGCAAGATCACC 65390 Query 113277 TCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCT 113336 || |||||| | | | |||||| |||||||| || || ||||| |||||||| | Sbjct 65391 TCGATGCACTTTGCCGGATGGAAGCTTGGTCTCAAGACCGGCATGTACTACCTCCGCACC 65450 Query 113337 AAGGCAAAGGCGC-GC-CCAATTCAGTTCA 113364 | ||| | | | || ||||||||||||| Sbjct 65451 ATGGC--CGCCTCTGCTCCAATTCAGTTCA 65478 >seq1363 Length=52244 Score = 113 bits (124), Expect = 6e-20 Identities = 152/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||||| || || | ||||| || || |||||| || ||| | ||| | || || Sbjct 38373 AGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAACTC 38432 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 ||||||| | || ||| | ||||| || || ||||||||||||||| ||| Sbjct 38433 CA---CCTTTGCCAACCGTCTCGTTGCATTCGCTGCCGTCGAGGGTATCTTCTTCAGTGG 38489 Query 102227 TTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || || ||| | || | |||||||||||||| ||||| ||||| ||||| |||| Sbjct 38490 ATCATT-TGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCTGGTCTTACTTTCT 38548 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGG 102313 |||||||||| ||||||||||||||||| Sbjct 38549 CCAACGAGCTCATCTCTCGTGACGAGGG 38576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620729674780800